DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 41/105 (39.05%), Postives = 68/105 (64.76%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE + ++ YYRG VYDIT D+FN W+K+ + + + ++ + L+GNK+D+ KR V ++G ++A++NG+ F+ETSAKTA N+ + F A ++ Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKI 166
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYR VYDIT DSF K + WVKEL+K +I + +VGNK DL ++R V Q+ YAE G TSAK I +LF ++ KR+ Sbjct: 73 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 177
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYDIT SF+ W++EL+ H +IV+ L+GNK+DL R VP +D E+AE+ +FF+ETSA + N+ F + + R Sbjct: 75 AGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYR 181
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = -1 Query: 200 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 502 AGQERY A+ YYRG VYDIT +F+ Q W++EL+ H +IV+ + GNK+DL R V +DG AEK G+ F+ETSA A NI + F+ I Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF++ WV +++ D+++ LVGNK DL +KR+V +DG + A + FIETSAK N+ QLF +IA LP Sbjct: 68 AGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALP 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 43/107 (40.19%), Postives = 70/107 (65.42%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H S ++V+ L+GNK+DL +R+V ++G +A ++G+ F+ETSAKTA N+ + F AK + R Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYR 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_HUMAN (Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYR VYDIT DSF K + WVKEL+K +I + +VGNK DL ++R V Q+ YAE G TSAK I +LF ++ KR+ Sbjct: 76 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 180
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_CANFA (Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 5.524e-19 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYR VYDIT DSF K + WVKEL+K +I + +VGNK DL ++R V Q+ YAE G TSAK I +LF ++ KR+ Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 178 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |