DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 70 AGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 70 AGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 70 AGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AG ERY A+ YYRG V+D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ FE + K + Sbjct: 69 AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_RAT (Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYR VYD+T DSF K + WVKEL+K +I + +VGNK DL ++R V Q+ YAE G TSAK I +LF ++ KR+ Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 178
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_MOUSE (Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYR VYD+T DSF K + WVKEL+K +I + +VGNK DL ++R V Q+ YAE G TSAK I +LF ++ KR+ Sbjct: 74 AGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 178
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_DICDI (Ras-related protein Rab-21 OS=Dictyostelium discoideum GN=rab21 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ AL P+YYRG VYDIT DSF KA+ W+KEL+ DI + ++GNK DL + R +P D YA+ G TSAK I +LF ++ +R+ Sbjct: 64 AGQERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGNKCDLEKTRVIPLADAEAYAKSVGAIHYSTSAKLNKGIEELFLDLTRRM 168
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 40/105 (38.10%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H +P++ + L+GNK DL +R V ++G ++A+++G+ F+ETSA+TA N+ + F AK + Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 40/105 (38.10%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H +P++ + L+GNK DL +R V ++G ++A+++G+ F+ETSA+TA N+ + F AK + Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADL------HEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+A LAP+YYR V+D+T+ SF KAQ WV+EL + DIV+ALVGNK DL +E R + A E+ + + E SAKT +NI Q+F+ + +++P Sbjct: 69 AGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKVP 180 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |