CN184572

Overview
NameCN184572
Unique NameCN184572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN184572_ssr16 microsatellite CN184572_ssr16:16..25. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:21..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_STAES (Enolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 120/232 (51.72%), Postives = 161/232 (69.40%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN +I P +   + +  +Q +ID  M+Q LDGT N     K KLGANAIL VS+AV +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA SFKE+++ G E++H+LK+++ ++  +  T VGDE GFAP  +  ++ +E +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEMIAPEIVEGEFSVLDQVSIDKMMIQ-LDGTHN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGAESFKESLRWGAEIFHNLKSILSERGLE--TAVGDEGGFAPRFEGTEDAVETI 224          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_STAEQ (Enolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 120/232 (51.72%), Postives = 161/232 (69.40%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN +I P +   + +  +Q +ID  M+Q LDGT N     K KLGANAIL VS+AV +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA SFKE+++ G E++H+LK+++ ++  +  T VGDE GFAP  +  ++ +E +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEMIAPEIVEGEFSVLDQVSIDKMMIQ-LDGTHN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGAESFKESLRWGAEIFHNLKSILSERGLE--TAVGDEGGFAPRFEGTEDAVETI 224          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_RHOSK (Enolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 122/231 (52.81%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   73 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A + +EA++MG EV+H LK  +    G   T +GDE GFAPNI   +E L+ +
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLKKELAA--GGFNTGIGDEGGFAPNISSTREALDYI 222          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_RHOS4 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 122/231 (52.81%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   73 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A + +EA++MG EV+H LK  +    G   T +GDE GFAPNI   +E L+ +
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLKKELAA--GGFNTGIGDEGGFAPNISSTREALDYI 222          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_RHOS1 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 122/231 (52.81%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   73 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A + +EA++MG EV+H LK  +    G   T +GDE GFAPNI   +E L+ +
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLKKELAA--GGFNTGIGDEGGFAPNISSTREALDYI 222          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_RHISN (Enolase OS=Rhizobium sp. (strain NGR234) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 120/229 (52.40%), Postives = 151/229 (65.94%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            I  +  R+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRDGG+ YLGKGV +AV  VN  I  A+ G D   Q  ID  M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++    G    +LPVP  N+INGG+HA N +  QEFMI+PVGA + K+A++MG EV+H LK  +  + G + TNVGDE GFAP +      L+ +
Sbjct:    4 IIDIIGREILDSRGNPTVEVDVHLEDGSFGRAAVPSGASTGAHEAVELRDGGTRYLGKGVERAVDAVNGEIFEAIGGLDAENQIQIDKTMI-ELDGTSN-----KSRLGANAILGVSLAIAKAAAEAAGLPLYRYV---GGPNAHLLPVPMMNIINGGAHADNPIDFQEFMIMPVGAETLKDAVRMGSEVFHTLKKQLAAE-GHN-TNVGDEGGFAPGLASAPAALDFI 221          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_PELPD (Enolase OS=Pelobacter propionicus (strain DSM 2379) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 124/230 (53.91%), Postives = 156/230 (67.83%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            I  + AR+I DSRGNPT+EVDV    G   RAAVPSGASTG  EALELRDG  + YLGKGV KAV NVN  I   L G D  +Q AIDN M++ LDGT       K KLGANA L VSLAV KA A    + L+K+I      +   LP+P  N++NGG+HA N + +QEFMI+P GA  F EA++MG E++H LK+V+K K G + T+VGDE GFAPN++ N+E L+++
Sbjct:    4 IVDIYAREILDSRGNPTLEVDVFLESGAFGRAAVPSGASTGEREALELRDGDMARYLGKGVLKAVDNVNNEIADELIGMDADDQVAIDNKMLE-LDGTE-----FKSKLGANATLGVSLAVAKAAADEAGLSLHKYIGGAGARE---LPLPMMNILNGGAHADNNVDIQEFMIMPAGARCFAEALRMGAEIFHALKSVLKGK-GYN-TSVGDEGGFAPNLKSNEEALQVI 222          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_PELLD (Enolase OS=Pelodictyon luteolum (strain DSM 273) GN=eno PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 121/230 (52.61%), Postives = 157/230 (68.26%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            I  + ARQI DSRGNPTVEVDV T +    RAAVPSGASTG++EA+ELRDG    YLGKGV KAV NVN +I  AL G   TEQ  ID  +++ LDGT N     K KLGANA+L VS+A  KAGA    + L+++I     N    LPVP  NV+NGG+HA N +  QEFMI+P+G S++ +A++ G E++H LKA++  +    +T VGDE GFAPN++ N+E +EL+
Sbjct:    4 IHKIHARQILDSRGNPTVEVDVYT-ESSFGRAAVPSGASTGVHEAVELRDGDKGVYLGKGVLKAVENVNTVIDEALRGMLVTEQEEIDARLLE-LDGTPN-----KSKLGANALLGVSMACAKAGAEYSGLSLFRYIGGTMAN---TLPVPMMNVLNGGAHADNTVDFQEFMIMPIGFSTYSDALRCGAEIFHALKALLHSR--GLSTAVGDEGGFAPNLRSNEEAIELV 221          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_CURLU (Enolase OS=Curvularia lunata PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55
Identity = 128/237 (54.01%), Postives = 163/237 (68.78%), Query Frame = 1
Query:   70 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKM--GVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            + IT + AR ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  + + GKGV+KAV+NVN II PAL  +  D  +Q+A+D ++  +LDGT N     K KLGANAIL VS+A+ KA A  K +PLY HI++L+G K   V    + NV+NGGSHAG  L  QEFMI P  A +F EA+++  G EVY  LKA+ KK YGQ A N GDE G AP+IQ  +E L+L+
Sbjct:    1 MAITKIHARSVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGSHEACELRDGDKTKWGGKGVTKAVANVNDIIAPALIKEKLDVKDQSAVDAFL-NKLDGTEN-----KTKLGANAILGVSMAIAKAAAAEKGVPLYAHISDLAGTKKPYVFRFLSKNVLNGGSHAGGFLLFQEFMIAP--AKTFAEALRIRQGAEVYQKLKALTKKTYGQSAGNYGDEGGVAPDIQTAEEALDLI 228          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_YERE8 (Enolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=eno PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.491e-55
Identity = 125/231 (54.11%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAV+ VN  I  A+ GKD  +Q  ID  M+  LDGT N     K + GANAILAVSLA  KA A  K +PLY+HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA + KEA+++G EV+H L  V+K K    +T VGDE G+APN+  N E L ++
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNGPIAQAVIGKDAKDQANIDKIMID-LDGTEN-----KSQFGANAILAVSLAAAKAAAASKGMPLYEHIAELNGTPGKFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHTLAKVLKAK--GMSTAVGDEGGYAPNLGSNAEALAVI 226          
The following BLAST results are available for this feature:
BLAST of CN184572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_STAES4.970e-5551.72Enolase OS=Staphylococcus epidermidis (strain ATCC... [more]
ENO_STAEQ4.970e-5551.72Enolase OS=Staphylococcus epidermidis (strain ATCC... [more]
ENO_RHOSK4.970e-5552.81Enolase OS=Rhodobacter sphaeroides (strain KD131 /... [more]
ENO_RHOS44.970e-5552.81Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]
ENO_RHOS14.970e-5552.81Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]
ENO_RHISN4.970e-5552.40Enolase OS=Rhizobium sp. (strain NGR234) GN=eno PE... [more]
ENO_PELPD4.970e-5553.91Enolase OS=Pelobacter propionicus (strain DSM 2379... [more]
ENO_PELLD4.970e-5552.61Enolase OS=Pelodictyon luteolum (strain DSM 273) G... [more]
ENO_CURLU4.970e-5554.01Enolase OS=Curvularia lunata PE=2 SV=1[more]
ENO_YERE86.491e-5554.11Enolase OS=Yersinia enterocolitica serotype O:8 / ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184572 ID=CN184572; Name=CN184572; organism=Citrus sinensis; type=EST; length=764bp
AGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTTC
CAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAGA
TCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATCA
GATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAAT
TTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAGG
GTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACTC
GCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTACA
ACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTTG
GAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGCA
CATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTAA
CAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGAT
CACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGTA
GGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATATCA
CCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTACAAATG
TTGGGGATGAAAGCGGTTTTGCTCCCAATATTCAGGAGAACAAGGAAGGA
CTTGAATTGCTCAA
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