DC887397

Overview
NameDC887397
Unique NameDC887397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.590e-76
Identity = 135/167 (80.84%), Postives = 151/167 (90.42%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  212 EGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.590e-76
Identity = 135/167 (80.84%), Postives = 151/167 (90.42%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  212 EGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.076e-76
Identity = 137/167 (82.04%), Postives = 149/167 (89.22%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLN  RF EA+KFG TEFVNPKD+ KPVQQV+ADMTNGGVDRSVECTG+V AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRMD
Sbjct:  212 EGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRMD 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.712e-76
Identity = 133/167 (79.64%), Postives = 152/167 (91.02%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLN +RF EAKKFG+TEFVNPKD+ KPVQ+VIA++TNGGVDRS+ECTG++QAMI AFECVHDGWGVAVLVGVP+KD  F THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYMNKELEV+KFITH +PFS+INKAFD ML GE IRCII M+
Sbjct:  213 EGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.542e-76
Identity = 131/167 (78.44%), Postives = 155/167 (92.81%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVD+NP+++ +AKKFG TEFVNPKD+DKPVQ+V+ ++TNGGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVP+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  212 EGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.296e-75
Identity = 129/167 (77.25%), Postives = 151/167 (90.42%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  +SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ +MTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  212 EGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.296e-75
Identity = 129/167 (77.25%), Postives = 151/167 (90.42%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  +SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ +MTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  212 EGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.724e-75
Identity = 133/167 (79.64%), Postives = 151/167 (90.42%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  +SGASRIIGVDL+  RF EAKKFGVTEFVNPK ++KPVQ+VIA++TN GVDRS+ECTGS +AMISAFECVHDGWGVAVLVGVP+KD  FKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYMNKELE+EKFITH VPFSEINKAF+ ML GE +RCIIRM+
Sbjct:  213 EGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRME 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 4.052e-72
Identity = 127/154 (82.47%), Postives = 143/154 (92.86%), Query Frame = -1
Query:  388 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 849
            +G  ++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM
Sbjct:  139 EGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 292          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 9.028e-72
Identity = 123/167 (73.65%), Postives = 147/167 (88.02%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  ++GASRIIGVDLNP+++ +AKKFG T+FVNPKD+ KPVQ+V+ +MTNGGVDR+VECTG + AMI+ FECVHDGWGVAVLVGVP+K+  FKTHPMN LNE+TLKGTFFGNYKPR+DLP VVE YM KEL++EKFITH+VPFS+IN AFDLML GE +RCI R D
Sbjct:  212 EGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTD 378          
The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_ORYSJ1.590e-7680.84Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.590e-7680.84Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1_HORVU2.076e-7682.04Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH_FRAAN2.712e-7679.64Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_MAIZE3.542e-7678.44Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH2_ORYSJ2.296e-7577.25Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI2.296e-7577.25Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH_MALDO8.724e-7579.64Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_ZEALU4.052e-7282.47Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH3_HORVU9.028e-7273.65Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]

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Properties
Property NameValue
Genbank descriptionDC887397 EIC Citrus sinensis cDNA clone EIC0315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bp
GACTGGCGTAATTACCATATCATTAACACTGCAACGGCGTATAAGAAAGA
AGATTTACACGAAAATCTTTATTACATAAGCTACAAAAAGAAGTACTGTA
AGAAATAGGTAGAAAACACACCTCTTTGTACGCCATATGCAGCAAGTCAT
CAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAGAAATATGTAGAAAA
CACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAA
ATTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCT
TCATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCAT
CCATGCGAATGATGCACCTAATGCTTTCTCCCGCAAGCATGAGGTCAAAT
GCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTGATGAATTTTTCGAC
CTCCAACTCCTTGTTCATGTATTTTTCAACAACAGAAGGAAGATCAGAGC
GAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGC
AGATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCAC
AAGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAAATCA
TGGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTG
GTCATGTCAGCAATCACCTGTTGAACAGGTTTGTCATAATCTTTTGGATT
CACAAACTCGGTAACCCCAAACTTCTTGGCTTCATTGAATCTGCTTGGGT
TCAAATCAACACCAATGATCCTGGAAGCCCCTGATACCCCTTGCCCCTT
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