DC887397

Overview
NameDC887397
Unique NameDC887397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.605e-44
Identity = 82/164 (50.00%), Postives = 120/164 (73.17%), Query Frame = -1
Query:  355 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 846
            G  V+GASRIIG+DLN  +F +AK+FG TE ++P D+ KP+Q+V+ +MT+GGVD S EC G+V  M +A E  H GWGV+V+VGV        T P  L+  RT KGT FG +K    +P +V++YM+K+++V++F+THT+PF +IN+AF+LM AG+SIR +++
Sbjct:  209 GCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.737e-44
Identity = 80/165 (48.48%), Postives = 122/165 (73.94%), Query Frame = -1
Query:  352 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            G  V+GASRIIGVD+N  +F +AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH++ F +IN+AF+LM AG+SIR ++++
Sbjct:  210 GCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.098e-44
Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G   +GASR+IG+D++  +F+ AK FGVTEFVNPK++DKP+QQV+ D+T+GGVD S EC G+V  M +A EC   GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +V+KYM KE++V+++ITH +  ++IN AF L+  G  +RC++ M
Sbjct:  214 EGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.774e-43
Identity = 81/165 (49.09%), Postives = 118/165 (71.52%), Query Frame = -1
Query:  352 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            G  V+GASRIIG+D+N  +F +AK+FG TE +NP+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +INKAFDLM +G SIR +++M
Sbjct:  210 GCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.962e-42
Identity = 78/165 (47.27%), Postives = 119/165 (72.12%), Query Frame = -1
Query:  352 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            G  V+GASRIIG+D+N  +F +AK+FG +E ++P+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +IN+AFDLM +G+SIR +++M
Sbjct:  210 GCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.562e-42
Identity = 78/166 (46.99%), Postives = 112/166 (67.47%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G  + GA++I+GVD+NP++  +AK FGVT+F+N  D  +P+ QVI  MT GG D S EC G      +A +   DGWG+ V +GVP        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F EINKAF LM  G+ +RC++ M
Sbjct:  214 QGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 77/165 (46.67%), Postives = 117/165 (70.91%), Query Frame = -1
Query:  352 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            G   +GASRII VD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ + T+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++ V++F+T+T+ F +IN+AF+LM +G+SIR ++++
Sbjct:  210 GCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKINVDEFVTNTLSFDQINEAFELMHSGKSIRTVVKI 374          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.832e-41
Identity = 79/163 (48.47%), Postives = 112/163 (68.71%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GA+RIIG+D+N S+F   KKFG+TEFVNPK + K VQ+V+ +MT+ GVD + EC G+V  M +A E  H GWG +V+VGV    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK+L +++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  212 GCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.090e-40
Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = -1
Query:  358 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 849
            +G   + A RII +D NP++F  AK+ G T+ +NPKD+D+P+QQVI +MT  GVD S EC G+V+ M SA EC H GWG +V++GV        T P  L+  R   GT FG  K RS LP +VE+ M  E+++  F+THT+   +IN+AFDLM  G+SIR +I
Sbjct:  204 QGARQAKAGRIIAIDTNPAKFELAKQMGATDCINPKDHDQPIQQVIVEMTGWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEQSMRGEIQLAPFVTHTMELKDINQAFDLMHDGKSIRSVI 367          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G    GASRIIGVD N S+F + K  GVT+F+NPKD  KPV Q+I ++T GGVD S ECTG+V  +  AF   H GWG  VLVG+         HPM L + R + G+ FG +KP+S LP+  ++ M   +++E FIT+ +PF +IN AF L+  G+S+RCI+++
Sbjct:  223 EGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388          
The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADHX_UROHA1.605e-4450.00Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HORSE2.737e-4448.48Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_MAIZE6.098e-4448.19Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_RAT1.774e-4349.09Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE1.962e-4247.27Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHL6_ARATH2.562e-4246.99Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RABIT4.370e-4246.67Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_OCTVU4.832e-4148.47Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
FRMA_SYNY34.090e-4047.56S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADHL3_ARATH9.112e-4046.99Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionDC887397 EIC Citrus sinensis cDNA clone EIC0315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bp
GACTGGCGTAATTACCATATCATTAACACTGCAACGGCGTATAAGAAAGA
AGATTTACACGAAAATCTTTATTACATAAGCTACAAAAAGAAGTACTGTA
AGAAATAGGTAGAAAACACACCTCTTTGTACGCCATATGCAGCAAGTCAT
CAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAGAAATATGTAGAAAA
CACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAA
ATTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCT
TCATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCAT
CCATGCGAATGATGCACCTAATGCTTTCTCCCGCAAGCATGAGGTCAAAT
GCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTGATGAATTTTTCGAC
CTCCAACTCCTTGTTCATGTATTTTTCAACAACAGAAGGAAGATCAGAGC
GAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGC
AGATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCAC
AAGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAAATCA
TGGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTG
GTCATGTCAGCAATCACCTGTTGAACAGGTTTGTCATAATCTTTTGGATT
CACAAACTCGGTAACCCCAAACTTCTTGGCTTCATTGAATCTGCTTGGGT
TCAAATCAACACCAATGATCCTGGAAGCCCCTGATACCCCTTGCCCCTT
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