DC887397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38 Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38 Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 355 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 849 +G + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV T P L+ R KG+ FG K RS LP +VE M ++++E F+THT+ EIN AFDLM G+SIR +IR Sbjct: 204 QGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 74/165 (44.85%), Postives = 110/165 (66.67%), Query Frame = -1 Query: 352 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846 G V+GASRII +D NP +F +A+ FG T+ V P DKP+ QV+ +MT+GG+D + EC G+V M +A E H GWGV+V++GV T P L+ RT KG FG +K +P +V+ YM ++ V++F++H++PF IN+AFDLM AG+SIR ++++ Sbjct: 212 GCRVAGASRIIAIDRNPDKFEKARIFGATDCVVPDASDKPISQVLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVTGRTWKGAAFGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVLQL 376
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38 Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = -1 Query: 358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846 G +GA+RII VD+N +F +AK+ G TE VNP+DYDKP+ QV+ +MT+GGVD S E G + M+SA C + GV+V+VGVP + PM LL+ R+ KG FG YK + D+P +V +M K+ +E IT+ PF++IN+ FDL+ AG+SIR ++ Sbjct: 211 GCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38 Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = -1 Query: 358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846 G +GA+RII VD+N +F +AK+ G TE VNP+DYDKP+ QV+ +MT+GGVD S E G + M+SA C + GV+V+VGVP + PM LL+ R+ KG FG YK + D+P +V +M K+ +E IT+ PF++IN+ FDL+ AG+SIR ++ Sbjct: 211 GCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38 Identity = 71/164 (43.29%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 358 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 849 +G + A RII +D NP++F AK+FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M A E H GWG ++++GV T P L+ R KG+ FG K RS+LP +VE M ++++E F+THT+P +IN+AF+LM G+SIR +I Sbjct: 213 QGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPQMVEDSMKGDIQLEPFVTHTMPLDKINEAFELMHEGKSIRTVI 376 The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bpback to top |