DC887397

Overview
NameDC887397
Unique NameDC887397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 3.033e-35
Identity = 68/163 (41.72%), Postives = 107/163 (65.64%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GA+RII VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  ++++  C H+  G +V+VGVP        +P+ LL  RT KG  FG +K +  +P +V  +M K+  ++  IT+ +PF +IN+ FDL+ +G+SIR I+
Sbjct:  211 GCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGVPPDSQNLSINPVLLLTGRTWKGAIFGGFKSKESVPKLVSDFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.174e-35
Identity = 76/168 (45.24%), Postives = 106/168 (63.10%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  + GA++IIGVDLNP++F   K+FG+T+FVNP    +K + +VI +MT+ G D S EC G    M  AF+    G G  +++G+  K         +LL  RT+ GT FG  KP+ D+P +V++Y+ KEL +E  ITH + F EINKAF L+  G SIRCII MD
Sbjct:  218 EGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSIRCIIWMD 385          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.174e-35
Identity = 72/164 (43.90%), Postives = 104/164 (63.41%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRIIGVD+N  +F +AK+ G TE +NP D+ KP+ +V+ D+T G GVD S E  G  + MISAF   H   G +V+VGVP        +P+ L   RT KG  FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ FDL+ +G+SIR ++
Sbjct:  210 GCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.757e-35
Identity = 72/170 (42.35%), Postives = 108/170 (63.53%), Query Frame = -1
Query:  358 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 849
            +G  ++GA  IIGVDLN  +   A+ FG+T F+NPK+ +  VQ+++ ++T       GG D S +CTG+V+ M  A EC H GWG ++++GV        T P  L+  R  KGT FG  + R+D+P +V+ YM+ ++E++  ITHT+   +INK FDLM AGESIR ++
Sbjct:  205 QGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEIV-NLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.153e-34
Identity = 69/163 (42.33%), Postives = 107/163 (65.64%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRII VD+N  +F +AK+ G TE +NP+DY KP+Q+VI ++++GGVD S E  G +  +++A    H   G +V+VGVP    +   +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  IT+ +PF +IN+ FDL+ +G+SIR I+
Sbjct:  211 GCKAAGASRIIAVDINKDKFPKAKEVGATECINPQDYKKPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 70/163 (42.94%), Postives = 104/163 (63.80%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRII +D+N  +F +AK+ G T+ VNPKD+ KP+ +V+ +MT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  +E  ITHT+PF +IN+ FDL+  G+SIR ++
Sbjct:  211 GCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.380e-34
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = -1
Query:  358 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 828
            A RI G+D+NP + N A  FG T+F+NP D   P+Q V+   T+GG+D + +CTG+V  M SA E  H GWG ++++GV        T P  L+  R  +G  FG  K RS LP +V++Y++ +LE++K+ITH  P  EIN+AF  M  G  I+ ++
Sbjct:  221 AGRIFGIDVNPEKKNWAMSFGATDFINPNDLQSPIQDVLIHETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVTGRVWRGCAFGGVKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVL 377          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 71/163 (43.56%), Postives = 101/163 (61.96%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G  V+GASRIIGVDLN  +F  AK+ G TE +NPKDY+ P+ +V+A MT+ GVD + E  G+   M SA    H G G  V+VG+          P+ +L  R L G  FG +K + D+P +V  Y+NK+ + +  ITH +PF +IN+ F+L+  G+SIR I+
Sbjct:  211 GCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 9.758e-34
Identity = 68/163 (41.72%), Postives = 105/163 (64.42%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G  ++GASRII +D+N  +F +AK  G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +++  +TH +PF  IN A DLM  G+SIR I+
Sbjct:  215 GCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 375          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 70/168 (41.67%), Postives = 106/168 (63.10%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP-VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G  + GASRIIGVD+NP++F   +KFGVTEFVN    +K  V +VI +MT+GG D   EC GS   +  A+ C   GWG  + +GV            ++L+  + L G+ FG  K ++ +P ++++Y++ ELE++KF+TH + F EIN AF L+L G+ IRC++ M
Sbjct:  222 EGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1G_PAPHA3.033e-3541.72Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADHL2_ARATH5.174e-3545.24Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]
ADH1_NAJNA5.174e-3543.90Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
FADH_PARDE6.757e-3542.35S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH1_RABIT1.153e-3442.33Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_APTAU2.568e-3442.94Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
FADH2_SCHPO4.380e-3442.04Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1_RANPE7.471e-3443.56Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH4_MOUSE9.758e-3441.72Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADHL7_ARATH2.174e-3341.67Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionDC887397 EIC Citrus sinensis cDNA clone EIC0315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bp
GACTGGCGTAATTACCATATCATTAACACTGCAACGGCGTATAAGAAAGA
AGATTTACACGAAAATCTTTATTACATAAGCTACAAAAAGAAGTACTGTA
AGAAATAGGTAGAAAACACACCTCTTTGTACGCCATATGCAGCAAGTCAT
CAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAGAAATATGTAGAAAA
CACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAA
ATTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCT
TCATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCAT
CCATGCGAATGATGCACCTAATGCTTTCTCCCGCAAGCATGAGGTCAAAT
GCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTGATGAATTTTTCGAC
CTCCAACTCCTTGTTCATGTATTTTTCAACAACAGAAGGAAGATCAGAGC
GAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGC
AGATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCAC
AAGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAAATCA
TGGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTG
GTCATGTCAGCAATCACCTGTTGAACAGGTTTGTCATAATCTTTTGGATT
CACAAACTCGGTAACCCCAAACTTCTTGGCTTCATTGAATCTGCTTGGGT
TCAAATCAACACCAATGATCCTGGAAGCCCCTGATACCCCTTGCCCCTT
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