DC887397

Overview
NameDC887397
Unique NameDC887397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 69/163 (42.33%), Postives = 101/163 (61.96%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRII VD+N  +F +AK  G T+ +NP++ +KPVQ VI +MTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTL+G+ FG +     +P +V  Y N +  +E  +THT+PF +IN+A DL+  G+SIR I+
Sbjct:  216 GCKTAGASRIIAVDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELILGRTLRGSSFGGWDV-DTVPKLVSDYKNGKFNLEALVTHTLPFEKINEALDLLKQGKSIRTIL 377          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 62/166 (37.35%), Postives = 106/166 (63.86%), Query Frame = -1
Query:  352 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 849
            +G    GAS+IIG+D+NP +F   ++ G++EF+NPK+ DK V + + ++T GGV+ S EC GS++A+  AF   + G GV V++GV         HPM L   R++  + FG +KP++ LP  + + +   L ++ FI+H +PF +IN+A  L+  G+++RC++ +
Sbjct:  215 EGARARGASKIIGIDINPDKFQLGREAGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGVHASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHDINEAMQLLHQGKALRCLLHL 380          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 69/164 (42.07%), Postives = 104/164 (63.41%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRIIG+D+N  +F +AK+ G TE VNP DY KP+ +V+ DMT+G GV+ S E  G    M +A    H+ +G +V+VGVP         P+ L   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ +G+SIR ++
Sbjct:  210 GCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 67/163 (41.10%), Postives = 103/163 (63.19%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRII +D+N  +F +AK  G T+ +NP++ +KPVQ VI +MTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTLKGT FG +   + +P +V  Y N + +++  +THT+PF +IN+A +L+  G+SIR ++
Sbjct:  216 GCKTAGASRIIAIDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILGRTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.325e-33
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = -1
Query:  349 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 849
            +G  + GA +IIGVDLNP +F   KKFG T+F+N     +  + +VI +MT GGVD S EC G    +  AF     G G  V++G+            +LL  R + G+ FG  KP+ D+P +V+ Y+ KEL ++ FITH + F EINKAFDL++ G+S+RCI+ M+
Sbjct:  221 EGARLRGAGKIIGVDLNPEKFELGKKFGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGKSLRCILWMN 388          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.079e-32
Identity = 64/163 (39.26%), Postives = 102/163 (62.58%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRIIG+D+N  +F +A   G TE ++PKD  KP+ +V++DMT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ ++++ ITHT+PF+ IN+ F+L+ +G+SIR ++
Sbjct:  210 GCKAAGASRIIGIDINKDKFQKALAVGATECISPKDSTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFELLYSGKSIRTVL 372          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 68/170 (40.00%), Postives = 99/170 (58.24%), Query Frame = -1
Query:  349 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP----VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            G   +GA +I+G+DL  S+F  AK FG TE +NPK  + P     Q  + +  +GG D + EC G+V  M  A E  H GWGV+ ++GV        T P  L+  RT KGT FG +K    +P +V+ YMNK+L +++FITH     +IN AFD++  GES+R ++  +
Sbjct:  213 GAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVLAFE 382          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 63/163 (38.65%), Postives = 101/163 (61.96%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRIIG+D+N  +F +A   G TE +NP+D+ KP+ +V++DMT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ ++ + ITHT+PF  I++ F+L+ +G+SIR ++
Sbjct:  210 GCKAAGASRIIGIDINKDKFQKALDVGATECINPRDFTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLSYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLGQLITHTLPFHNISEGFELLYSGQSIRTVL 372          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 68/164 (41.46%), Postives = 101/164 (61.59%), Query Frame = -1
Query:  358 GQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            G   +GASRIIGVD+N  +F +AK+ G TE VNP DY KP+ +V+ D+T G GVD S E  G    M +A    H  +G +++VG+P         P  +   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ AG+SIR ++
Sbjct:  210 GCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSPGLIFTGRTWKGSVFGGWKSKDSVPRLVSDFMQKKFSLDPLITHTMPFDKINEGFELLRAGKSIRSVL 373          
BLAST of DC887397 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32
Identity = 68/170 (40.00%), Postives = 103/170 (60.59%), Query Frame = -1
Query:  358 KGQGVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 849
            +G  ++GA  IIGVDLN ++    ++FG+T FVNP + D  V   + +MT       GG D + +CTG+V+ M  A E  H GWG ++++GV       +T P  L+  R  KG+ FG  + R+D+P +V+ YM  +++++  ITH +   EINK FDLM AGESIR ++
Sbjct:  205 QGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGRTDVPKIVDWYMEGKIQIDPMITHILSLEEINKGFDLMHAGESIRSVV 374          
The following BLAST results are available for this feature:
BLAST of DC887397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADHQ_RABIT2.839e-3342.33Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHL4_ARATH2.839e-3337.35Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADH1B_UROHA2.839e-3342.07Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHP_RABIT4.843e-3341.10Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADHL5_ARATH6.325e-3342.26Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADH7_MOUSE1.079e-3239.26Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADHX_CAEEL1.840e-3240.00Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH7_RAT1.840e-3238.65Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH1A_UROHA1.840e-3241.46Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADHI_RHOS45.354e-3240.00Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]

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Properties
Property NameValue
Genbank descriptionDC887397 EIC Citrus sinensis cDNA clone EIC0315 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887397 ID=DC887397; Name=DC887397; organism=Citrus sinensis; type=EST; length=849bp
GACTGGCGTAATTACCATATCATTAACACTGCAACGGCGTATAAGAAAGA
AGATTTACACGAAAATCTTTATTACATAAGCTACAAAAAGAAGTACTGTA
AGAAATAGGTAGAAAACACACCTCTTTGTACGCCATATGCAGCAAGTCAT
CAAACAGAAAAACAAAACAAAAAAAGGGACTGTAAGAAATATGTAGAAAA
CACAACTCTTTGAAAGCCATTCGCAGCAAGTCATCAAACATACAGCATAA
ATTACTTATTCTCGGGGTAATATATAACTTGGAAAATTATGTGATCATCT
TCATTCTGCCTCCATTAGATTGATCAGCAACAGCAGACACATCTAACCAT
CCATGCGAATGATGCACCTAATGCTTTCTCCCGCAAGCATGAGGTCAAAT
GCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAGTGATGAATTTTTCGAC
CTCCAACTCCTTGTTCATGTATTTTTCAACAACAGAAGGAAGATCAGAGC
GAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAGAGTCCTCTCATTAAGC
AGATTCATGGGATGAGTCTTGAATGCATCATCTTTGTTTGGCACACCCAC
AAGCACAGCAACACCCCAACCATCGTGAACGCATTCAAATGCTGAAATCA
TGGCCTGGACGCTTCCAGTACATTCAACACTTCTATCCACTCCACCATTG
GTCATGTCAGCAATCACCTGTTGAACAGGTTTGTCATAATCTTTTGGATT
CACAAACTCGGTAACCCCAAACTTCTTGGCTTCATTGAATCTGCTTGGGT
TCAAATCAACACCAATGATCCTGGAAGCCCCTGATACCCCTTGCCCCTT
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