CN184558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_METM6 (50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl23p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 178 LDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 432 +D + ++K P+ +E MK IE+ N LVF V+ +A K I A+K++++ + +NT I P G KKAY+ L +Y+A +VA +GI Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADISAAIKELFDAEVADINTSITPKGKKKAYITLKAEYNAGEVAASLGI 85
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_HALSA (50S ribosomal protein L23P OS=Halobacterium salinarium GN=rpl23p PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = -3 Query: 178 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 417 I+ YPL TE AM +++ N L FIVDI A K +I+D V+ Y++ VNT I P+ KKA V+L+ + DA DVA++IG+ Sbjct: 4 IIDYPLVTEKAMDEMDFQNKLQFIVDIDAAKPEIRDVVESEYDVTVVDVNTQITPEAEKKATVKLSAEDDAQDVASRIGV 83
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_ARCFU (50S ribosomal protein L23P OS=Archaeoglobus fulgidus GN=rpl23p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.057e-13 Identity = 34/80 (42.50%), Postives = 56/80 (70.00%), Query Frame = -3 Query: 178 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 417 ++K L TE ++ ++E N L IVD+RA K IK ++K++ ++ ++VNTLI P G KKAY++L PDY A ++ +K+G+ Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKKAYIKLKPDYSAEEILSKLGV 82
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_HALMA (50S ribosomal protein L23P OS=Haloarcula marismortui GN=rpl23p PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 3.992e-13 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = -3 Query: 178 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 423 + ++K+P TE AM ++ N L F VD RA K ++ DAV++ Y++ ++VNT DG KKA VRL+ D DA +VA++IG+ Sbjct: 3 WDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRIGV 84
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_HALWD (50S ribosomal protein L23P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl23p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.284e-11 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 178 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 417 +++YPL TE AM +++ +N L FIVD A K +I++ ++ YEI T I P KKA VRL+ D DA D+A++IG+ Sbjct: 4 LIEYPLVTEKAMDEMDFDNKLQFIVDTDATKDEIENEIESRYEITIIDTKTQITPRAKKKATVRLSDDDDAQDIASRIGV 83
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_METTH (50S ribosomal protein L23P OS=Methanobacterium thermoautotrophicum GN=rpl23p PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.191e-11 Identity = 28/85 (32.94%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 178 LDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 432 +D Y ++ P TE +M I+ NN L F+V ++ K+ ++ A ++++ ++ ++VNT + P G K AY++L ++ A D+A K+G+ Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTPRGQKIAYIKLAKEHSAEDIAVKLGV 85
BLAST of CN184558 vs. ExPASy Swiss-Prot
Match: RL23_NATPD (50S ribosomal protein L23P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl23p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.325e-11 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = -3 Query: 178 LKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 414 +K+PL TE AM ++ N L F+ A K I AV+ ++++ +NT +R DG KKA V L+ D DA +VA++IG+ Sbjct: 3 IKHPLVTEKAMNDMDFENKLQFVCHPEATKGDIAAAVESQFDVEVDSINTQVRMDGDKKAIVELSADDDAQEVASRIGV 81 The following BLAST results are available for this feature:
BLAST of CN184558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184558 ID=CN184558; Name=CN184558; organism=Citrus sinensis; type=EST; length=482bpback to top |