EY666424

Overview
NameEY666424
Unique NameEY666424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC8_DANRE (Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.393e-58
Identity = 110/229 (48.03%), Postives = 152/229 (66.38%), Query Frame = 3
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIFHVP 695
            FH D Y+  L  I+ +   D   Q   F +G DCPV +G+F +     G ++  A  L  G CD+AINWAGG HHAKK EASG CYVND VL IL+L ++++RVLYVD+D+HHGDGVE+AF  T +VMTVS HKF   +FPGTGD+ D G  KG++Y++NVP +DG+ D+ Y   F  ++ +V  +F P AV +Q GAD+++GD + SF  +  G AK + +I  + +P
Sbjct:   71 FHTDSYLQHLHKISQDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMCSFNMTPVGVAKCLTYILGWELP 298          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC8_BOVIN (Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.032e-58
Identity = 104/223 (46.64%), Postives = 151/223 (67.71%), Query Frame = 3
Query:   12 FHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFI 677
            FH D Y+  L+ ++ +   D    ++ + +G DCP  +G+F +     G ++  A  L  G+C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF  T +VMTVS HKF   +FPGTGD+ D+G  KG++YS+NVP+ D I DE Y+++ + ++ +V   F P AV LQ GAD+++GD + SF  +  G  K +K+I
Sbjct:   70 FHTDAYLQHLQKVSEDGDDDHPDSIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYI 291          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HOS1_YEAST (Histone deacetylase HOS1 OS=Saccharomyces cerevisiae GN=HOS1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.074e-34
Identity = 76/193 (39.38%), Postives = 111/193 (57.51%), Query Frame = 3
Query:   81 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLK-QHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKG 653
            + K++N+  DCP+F  L  +CQ   G ++     L+     I INW GG HHA K  ASGFCY+ND+VL I  L K +  ++ YVD D+HHGDGVE+AF  + ++ T+S H +   +FPGTG + D    K     +N+PL  G DD     +   I+  ++E   P A+ ++CG D L GDR   +  +I+G
Sbjct:  160 ETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTGSLSDSRKDKN---VVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRG 349          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_BACSU (Acetoin utilization protein acuC OS=Bacillus subtilis GN=acuC PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 76/201 (37.81%), Postives = 108/201 (53.73%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE-RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADS 608
            H DDY+  ++       +    + + + +G ED PVF G+        GG++  A  +  G    A N  GGLHH  +  ASGFC  ND  +AI  + K++  RVLY+D D HHGDGV+  FY    V T+S H+ G Y FPGTG I++ G  KG  YS N+PLD   +D+S+   ++    +V   F P  +  Q GAD+
Sbjct:   61 HTDDYIQAVK--LAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGADA 259          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: Y130_ARCFU (Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus GN=AF_0130 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26
Identity = 75/220 (34.09%), Postives = 115/220 (52.27%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIA---INWAGGLHHAKKCEASGFCYVNDIVLAILELLKQ-HERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAK 662
            H ++YV FL          ++   K   +  D  +  G+F      AGG++  A  + +  C+ A   I   G  HHAK    +GFCY+N++ + +  LLKQ  ER+  +D D HHGDG +E FY  DRV+ +S H+   Y PGTG   + G  KG+ Y++N+PL  G  DE Y  +   II  V+  F+P  +A+  G D+   D + S   + +G+A+
Sbjct:   62 HTEEYVRFL----------EMESKKGGIIDFDTNIPVGVFDRALLAAGGAIRAAQAVLNKECENAFAMIRPPG--HHAKPYIGAGFCYLNNMAIMVKWLLKQGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQMPLY-PGTGYPEECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPITSLALTARGYAE 268          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_STAXY (Acetoin utilization protein acuC OS=Staphylococcus xylosus GN=acuC PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.652e-25
Identity = 66/200 (33.00%), Postives = 107/200 (53.50%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNV-GEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELL-KQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGAD 605
            HA DY+  +R  +     +   + K++ + GED   F  +        GG++  A ++  G      +  GGLHH+    A+GFC  ND+ + I  L+ K ++RVL +D D HHGDG + +FYT D+ +  S H+ G + FPG+G   + G  KG  Y++N+PL+   +D+S+  +FK  I  V+  F+P  +    G D
Sbjct:   65 HAYDYIQAIRHASHGILSEN--EAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETGKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQTIEPVVASFKPDIIVSVHGVD 262          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_STAAR (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MRSA252) GN=acuC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.324e-21
Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  123 DGLFSFCQTYAGGSVGGAVKLNH----GLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGAD 605
            +G F     ++   VGGA+ L      G      +  GGLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG + +FY  + V T S H+ G + FPG+G   + G   G  +++NVPL+   +D S+   FK  +  V++ F+P  +    G D
Sbjct:   96 NGQFKHMHRHSATIVGGALTLADLIMSGKALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVD 262          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_STAAC (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain COL) GN=acuC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.324e-21
Identity = 64/203 (31.53%), Postives = 105/203 (51.72%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAI----NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGAD 605
            H  DYV  ++  +     +   + K++ + ++    +G F     ++   VGGA+ L   +    +    +  GGLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG + +FY  + V T S H+ G + FPG+G   + G   G  +++NVPL+   +D S+   FK  +  V++ F+P  +    G D
Sbjct:   65 HKYDYVEAIKHASHGIISED--EAKKYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_STAAW (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MW2) GN=acuC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.035e-21
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGAD 605
            H  DYV  ++  +     +   + K++ +  E+   F  +     T  GG++  A  +  G      +  GGLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG + +FY  + V T S H+ G + FPG+G   + G   G  +++NVPL+   +D S+   FK  +  V++ F+P  +    G D
Sbjct:   65 HKYDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262          
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: ACUC_STAAS (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MSSA476) GN=acuC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.035e-21
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   15 HADDYVSFLRSITPETQQDQLRQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDY-FPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGAD 605
            H  DYV  ++  +     +   + K++ +  E+   F  +     T  GG++  A  +  G      +  GGLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG + +FY  + V T S H+ G + FPG+G   + G   G  +++NVPL+   +D S+   FK  +  V++ F+P  +    G D
Sbjct:   65 HKYDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVD 262          
The following BLAST results are available for this feature:
BLAST of EY666424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
HDAC8_DANRE1.393e-5848.03Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2... [more]
HDAC8_BOVIN9.032e-5846.64Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 ... [more]
HOS1_YEAST1.074e-3439.38Histone deacetylase HOS1 OS=Saccharomyces cerevisi... [more]
ACUC_BACSU7.968e-3037.81Acetoin utilization protein acuC OS=Bacillus subti... [more]
Y130_ARCFU1.406e-2634.09Uncharacterized protein AF_0130 OS=Archaeoglobus f... [more]
ACUC_STAXY2.652e-2533.00Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAR2.324e-2135.93Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAC2.324e-2131.53Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAW3.035e-2132.00Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAS3.035e-2132.00Acetoin utilization protein acuC OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666424 ID=EY666424; Name=EY666424; organism=Citrus sinensis; type=EST; length=812bp
CCACGCGTCCGTTCCATGCCGATGATTATGTCTCCTTCCTCAGGAGTATC
ACCCCTGAGACTCAGCAGGATCAGCTTAGGCAGCTCAAGCGCTTTAATGT
TGGTGAAGATTGCCCTGTCTTTGACGGTCTTTTCTCCTTCTGTCAAACTT
ATGCTGGGGGCTCTGTTGGTGGTGCTGTCAAGTTGAATCACGGCCTCTGT
GATATTGCTATCAATTGGGCCGGTGGCCTTCATCATGCTAAGAAATGTGA
AGCTTCCGGATTCTGTTATGTCAATGACATTGTCTTGGCCATTTTGGAGC
TACTTAAGCAGCATGAGCGTGTATTATATGTAGATATTGATATCCATCAT
GGAGATGGCGTGGAGGAAGCATTTTATACAACTGATAGGGTAATGACTGT
TTCATTCCATAAGTTCGGAGATTATTTTCCTGGTACAGGGGATATACGTG
ATATTGGTTATTCGAAAGGAAAGTTCTACTCCCTTAATGTTCCTCTTGAT
GATGGTATCGATGATGAGAGCTACCATTACTTGTTCAAACCGATAATCGG
AAAAGTGATGGAAGTTTTTAGACCTGGTGCTGTGGCCCTCCAATGTGGTG
CTGACTCATTGTCTGGGGATAGGTTAGAATCCTTCATCTTTTCAATTAAA
GGGCATGCAAAAGGGGTCAAATTTATTAAAATATTCCATGTGCCTCTGTT
GCTGCTGGGTGGGGGGGGGTAACCCTATTCGAATTGTTGCTCCCTGGTTG
GGGTCACAAAAAGGGAATTTGCCTTTGGAACAAAAAGTTGAAGAACAAAA
TCCCCAAGGATT
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