EY666424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC7_HUMAN (Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.193e-17 Identity = 44/137 (32.12%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSG 617 HHA A GFC+ N + +A +L +Q + ++L VD D+HHG+G ++ FY V+ +S H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ + F P V + G D+ G Sbjct: 669 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEG 805
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC4_RAT (Histone deacetylase 4 OS=Rattus norvegicus GN=Hdac4 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.559e-17 Identity = 45/138 (32.61%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSG 617 HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ + F P V + G D++ G Sbjct: 795 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEG 931
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: CLR3_SCHPO (Histone deacetylase clr3 OS=Schizosaccharomyces pombe GN=clr3 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.559e-17 Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGT--GDIRDIGYSKGKFYSLNVPLD-DGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHA 659 HHA+ + GFC N++ + +L++ +RVL VD DIHHG+G + AFY V+ VS H++ G ++PGT G + G G ++N+P G+ D Y Y F+ ++ V F P V + CG D+ +GD + F+ + +A Sbjct: 194 HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYA 345
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC4_HUMAN (Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 2.036e-17 Identity = 45/138 (32.61%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSG 617 HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY+ V+ +S H++ G++FPG+G ++G G +++N+ G+D D Y F+ ++ + F P V + G D++ G Sbjct: 802 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEG 938
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC7_MOUSE (Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17 Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSG 617 HHA A GFC+ N + +A +L +QH ++L VD D+HHG+G ++ FY V+ +S H+ G++FPG+G + ++G G+ +++NV G+D D Y F+ ++ + F P V + G D+ G Sbjct: 656 HHADHSTAMGFCFFNSVAIACRQL-QQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEG 792
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDA15_ARATH (Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17 Identity = 58/177 (32.77%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 147 TYAGGSVGGAVKLNHGLC-DIAINWAGGL------------HHAKKCEASGFCYVNDI-VLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLD-DGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRL 626 TYA A +L GLC D+A + G HHA A GFC N+ V A++ ++VL VD D+HHG+G +E F V+ +S H+ G ++PGTG ++G + G+ Y +NVP G+ D+ Y + F+ ++ + F P V + G D+ GD L Sbjct: 235 TYANEYSARAARLAAGLCTDLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGIFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPL 411
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: Y535_METJA (Uncharacterized protein MJ0535 OS=Methanocaldococcus jannaschii GN=MJ0535 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 252 ASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLES 632 ++GFC N+I A ++V+ +D D+HHG+G +E F+ +RV+ + FH+ G Y PGTGDI DIG + K +N+P D Y + + I+ ++ F P V + G D+ D L S Sbjct: 136 SNGFCIFNNIAGAARLAKNYMKKVIIIDFDVHHGNGTQEIFWNDNRVIHIDFHQRGIY-PGTGDILDIGGEEAKGTKINLPFPAHSTDADYIFAWNEIVEPILNYFSPDTVLVSAGFDAFINDGLAS 261
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDA18_ARATH (Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 69/236 (29.24%), Postives = 115/236 (48.73%), Query Frame = 3 Query: 15 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL--CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK--FGDYFP--GTGDIRDIGYSKGKFYSLNVPLDD-GIDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIF 686 H +V+ ++SI+ T++ R+ K + + + G AG V A K+ G C AI G HHA+ EA GFC N++ +A LL + +++L VD DIHHG+G ++ F+ RV+ S H+ G ++P GD +G G+ +++NVP + G D Y ++ I+ V + F+P + L G D+ GD L + G++ +K + F Sbjct: 119 HTKKHVNLVKSIS--TKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEF 351
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDAC4_MOUSE (Histone deacetylase 4 OS=Mus musculus GN=Hdac4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17 Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 231 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF--GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGID----DESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSG 617 HHA++ GFCY N + +A +LL+Q ++L VD D+HHG+G ++AFY V+ +S H++ G++FPG+G ++G G +++N+ G++ D Y F+ ++ + F P V + G D++ G Sbjct: 794 HHAEESTPMGFCYFNSVAVAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEG 930
BLAST of EY666424 vs. ExPASy Swiss-Prot
Match: HDA5_ARATH (Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 69/236 (29.24%), Postives = 113/236 (47.88%), Query Frame = 3 Query: 15 HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL--CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIHHGDGVEEAFYTTDRVM--TVSFHKFGDYFPG--TGDIRDIGYSKGKFYSLNVPLDDG-IDDESYHYLFKPIIGKVMEVFRPGAVALQCGADSLSGDRLESFIFSIKGHAKGVKFIKIF 686 H D+V+ ++SI+ T+Q R+ + + + G AG V A K+ G C AI G HHA+ EA GFC N++ +A LL + +++L VD D+HHG+G ++ F+ RV+ +V H++G ++P GD +G G+ +++NVP D G D Y + I+ V F P + L G D+ D L + G++ +K + F Sbjct: 86 HTKDHVNLVKSIS--TKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEF 318 The following BLAST results are available for this feature:
BLAST of EY666424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666424 ID=EY666424; Name=EY666424; organism=Citrus sinensis; type=EST; length=812bpback to top |