CN184543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4_EUPCR (Histone H4 OS=Euplotes crassus PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 1.033e-29 Identity = 63/78 (80.77%), Postives = 72/78 (92.31%), Query Frame = -2 Query: 199 RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 432 +K LR+ I G+TKPAIRRLARRGGVKRIS L+YEETR VLK FLE+VIRD+VTYTEHA+RKTVTA+DVVYALKRQG+T Sbjct: 24 KKALRETILGVTKPAIRRLARRGGVKRISSLVYEETRAVLKGFLESVIRDSVTYTEHAKRKTVTALDVVYALKRQGKT 101
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4_TETTH (Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 3.005e-29 Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = -2 Query: 199 RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 432 RK + +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 20 RKSNKASIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 3.005e-29 Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = -2 Query: 199 RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 432 RK + +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 20 RKSNKASIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.142e-28 Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = -2 Query: 199 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 414 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRT Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.491e-28 Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = -2 Query: 199 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 429 K +D ++GITKPAIRRLARRGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRT Sbjct: 37 KTQQDALKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRT 113
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.322e-28 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = -2 Query: 199 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 435 H+K +++I GITKPAIRRLARRGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRT Sbjct: 24 HKKTQKEHINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRT 102
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.339e-28 Identity = 65/79 (82.28%), Postives = 67/79 (84.81%), Query Frame = -2 Query: 199 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 435 HRKVL DNIQGITK IRRLAR GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRT Sbjct: 19 HRKVLSDNIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRT 97
BLAST of CN184543 vs. ExPASy Swiss-Prot
Match: H4_ENCCU (Histone H4 OS=Encephalitozoon cuniculi GN=HHF1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.221e-11 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = -2 Query: 205 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 402 I+KPAIRR+ARR GV+R+ G ++E + ++ + + A Y HA+RKT+T D++++LKR G Sbjct: 32 ISKPAIRRIARRAGVRRVGGGCFKEINNAAREYIRDTLSIACIYATHAKRKTITCSDILHSLKRMG 97 The following BLAST results are available for this feature:
BLAST of CN184543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184543 ID=CN184543; Name=CN184543; organism=Citrus sinensis; type=EST; length=436bpback to top |