CN184538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.031e-33 Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 +A G ++ +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA P+ NISGGH+NPAVTFG VGG+I++L G+ YWIAQLLG+++ACLLLKFVT Sbjct: 4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVT 123 HSP 2 Score: 49.2914 bits (116), Expect = 1.031e-33 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 2 Query: 455 SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 +G+ VV EIV+TF LVYTVYATA DPKKGS Sbjct: 134 AGISELEGVVMEIVITFALVYTVYATAADPKKGS 167
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.749e-33 Identity = 56/121 (46.28%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 58 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 NIA G ++ +L+A +AEFISTL+FVFAG GS +A+ KLT P+ NISGGHVNPAVTFG +GG I++L G+ YWIAQLLG+ V +L++F T Sbjct: 4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT 124 HSP 2 Score: 58.151 bits (139), Expect = 1.749e-33 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2 Query: 455 SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 SGVGA+ VV EI++TFGLVYTVYATA DPKKGS Sbjct: 134 SGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS 167
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.318e-28 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 43 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--QRPDHICFCSLIWSW 465 + P R VG +ATHPD +RAA++EFI+T IFVFA EGS ++ K+ H+ +T NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+ A LLL+ T RP S + W Sbjct: 5 VRPGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDW 146
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.391e-27 Identity = 63/141 (44.68%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 49 PIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--QRPDHICFCSLIWSW 465 P R VG +ATHPD +RAA++EF++T IFVFA EGS ++ KL + +TP NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+ T RP S + W Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKL-YQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDW 147
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.800e-27 Identity = 55/118 (46.61%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 64 AVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFV 417 A+GH REA+ +RA LAE I T +FVFAG GS MA KL G +T ++SGGH+NPAVT G G I+L R LY AQLLGST+ACLLL F+ Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFL 122 HSP 2 Score: 42.743 bits (99), Expect = 7.800e-27 Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 2 Query: 446 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK 550 AL +GVGA V+ E V+TF L++ VYAT +DP++ Sbjct: 133 ALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR 167
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.017e-25 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 +A G R++ +L+A +AEFI+TL+FVFAG GS +A+++LT GA P+ NISGGH+NPAVTFG VGG+I++L GILYW+AQLLG++VAC LL++VT Sbjct: 4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVT 123
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 +A G ++ +++A +AEFI+TL+FVFAG GS +AF +LT+ GA P+ N SGGH+NPAVTFG VGG+I++L G+ YW+AQLLG++VACLLL+FVT Sbjct: 4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVT 123
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.750e-23 Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 94 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 P A RAAL+EF++T +FVFA EGS K+ + T N SGGHVNPAVTFG VG IS R LYW AQLLG+ +A LLL+ + Sbjct: 25 PGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLAS 132 HSP 2 Score: 45.0542 bits (105), Expect = 2.750e-23 Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 425 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKG 553 G F L + +A++ E+VMTFGLVYTVYATA+D + G Sbjct: 134 GMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSG 176
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.865e-20 Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 52 IRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 ++ I +GH EA PD ++A + EFI+T +FVFAG GS MA + L N +ISGGH+NPAVT G +GG+IS+ R LYWI QLL S+ AC LL ++T Sbjct: 1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLT 119
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.888e-20 Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 +A+GH REAT P LRA +AE + T +FVF+G GS MA KL G +T ++SGGH+NPAVT G GG+I+L R LY AQLLGS++ACLLL +T Sbjct: 4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALT 122 The following BLAST results are available for this feature:
BLAST of CN184538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184538 ID=CN184538; Name=CN184538; organism=Citrus sinensis; type=EST; length=558bpback to top |