CN184538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.834e-12 Identity = 36/116 (31.03%), Postives = 55/116 (47.41%), Query Frame = 1 Query: 82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 E T RA +AEF++TL+F++ + + + + GAN +SGGH+NPAVTFG F+ +SL+R +LY +AQ LG+ L+K Sbjct: 34 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVK 149 HSP 2 Score: 30.0314 bits (66), Expect = 6.834e-12 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 449 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 LS G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 166 LSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNA 200
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.839e-12 Identity = 36/116 (31.03%), Postives = 55/116 (47.41%), Query Frame = 1 Query: 82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 E T RA +AEF++TL+F++ + + + T A+ P +SGGH+NPAVTFG F+ +SL+R +LY +AQ LG+ L+K Sbjct: 29 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVK 144 HSP 2 Score: 30.4166 bits (67), Expect = 6.839e-12 Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 449 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 LS+G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 161 LSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNA 195
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12 Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 103 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP-SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT 420 +RA LAE + T +FVF G + MA G P + ++SGGH+NPAVT G V G+I+ LR +LY AQLL S+ AC+LL+F++ Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLS 129
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.153e-11 Identity = 35/108 (32.41%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 RA +AEF++TL+F++ + + + T A+ ISGGH+NPAVTFG F+ +SL+R ILY +AQ LG+ L+K Sbjct: 36 RAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVK 143 HSP 2 Score: 30.4166 bits (67), Expect = 1.153e-11 Identity = 19/51 (37.25%), Postives = 28/51 (54.90%), Query Frame = 2 Query: 404 FLSSLPNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 F SS + A L++G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 145 FQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNA 194
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.496e-11 Identity = 35/108 (32.41%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 RA +AEF++TL+F++ + + + T A+ P ISGGH+NPAVTFG F+ +SL+R +LY AQ LG+ L+K Sbjct: 41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVK 148 HSP 2 Score: 29.6462 bits (65), Expect = 1.496e-11 Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 449 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 +S+G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 165 VSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNA 199
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.521e-11 Identity = 36/108 (33.33%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 RA +AEFI+TL+F++ + + + T A+ ISGGH+NPAVTFG F+ +SL+R ILY +AQ LG+ L+K Sbjct: 42 RAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVK 149 HSP 2 Score: 30.8018 bits (68), Expect = 2.521e-11 Identity = 19/51 (37.25%), Postives = 28/51 (54.90%), Query Frame = 2 Query: 404 FLSSLPNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 F S+ N A L++G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 151 FQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNA 200
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.522e-11 Identity = 38/116 (32.76%), Postives = 54/116 (46.55%), Query Frame = 1 Query: 82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 E T RA +AEFI+TL+F++ + + + + NT ISGGH+NPAVTFG F+ +SL+R +LY IAQ LG+ L+K Sbjct: 33 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVK 148 HSP 2 Score: 28.8758 bits (63), Expect = 2.522e-11 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 449 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 LS G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 165 LSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNA 199
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.524e-11 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTQRP 429 RAA+AEFI+TL+F++ + + + K T A+ ISGGH+NPAVTFG F+ +SLLR ++Y IAQ G+ L+K + P Sbjct: 40 RAAIAEFIATLLFLYITVATVIGYKKETDPCASV--GLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGP 145 HSP 2 Score: 26.5646 bits (57), Expect = 2.524e-11 Identity = 15/39 (38.46%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 440 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 A +++ G A E++ TF LVYTV+ +A DPK+ + Sbjct: 153 ANSVALGYNKGTAFGAELIGTFVLVYTVF-SATDPKRSA 190
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 3.274e-11 Identity = 34/108 (31.48%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTH---NGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 RA +AEF++TL+F++ + + + T NGA+ +SGGH+NPAVT G F+ +SL+R +LY AQ LG+ L+K Sbjct: 39 RALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVK 146 HSP 2 Score: 32.3426 bits (72), Expect = 3.274e-11 Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 2 Query: 404 FLSSLPNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 F SSL + A L++G + EI+ TF LVYTV+ +A DPK+ + Sbjct: 148 FQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNA 197
BLAST of CN184538 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 4.251e-11 Identity = 33/106 (31.13%), Postives = 51/106 (48.11%), Query Frame = 1 Query: 106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGAN----TPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK 411 RA +AEFI+TL+F++ + + + T N T ISGGH+NPAVTFG + ++L+R ++Y +AQ LG+ L+K Sbjct: 38 RALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVK 143 HSP 2 Score: 31.5722 bits (70), Expect = 4.251e-11 Identity = 18/39 (46.15%), Postives = 23/39 (58.97%), Query Frame = 2 Query: 440 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS 556 A LS G V EI+ TF LVYTV+ +A DPK+ + Sbjct: 157 ANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSA 194 The following BLAST results are available for this feature:
BLAST of CN184538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184538 ID=CN184538; Name=CN184538; organism=Citrus sinensis; type=EST; length=558bpback to top |