CN184535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y2736_MYCBO (UPF0678 fatty acid-binding protein-like protein Mb2736c OS=Mycobacterium bovis GN=Mb2736c PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 20 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 PA+ +S LLG+W G+G+G YPTI F+Y EE+ F H G KP + YTQ+T + G+P+H+E+GY R G +E+V+A +G+ E++ GTY+ VI+L+ L A +V + R + + EL Y +QM L+ HL AVL + Sbjct: 7 PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y2730_MYCBP (UPF0678 fatty acid-binding protein-like protein BCG_2730c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2730c PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 20 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 PA+ +S LLG+W G+G+G YPTI F+Y EE+ F H G KP + YTQ+T + G+P+H+E+GY R G +E+V+A +G+ E++ GTY+ VI+L+ L A +V + R + + EL Y +QM L+ HL AVL + Sbjct: 7 PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y2717_MYCTU (UPF0678 fatty acid-binding protein-like protein Rv2717c/MT2790 OS=Mycobacterium tuberculosis GN=Rv2717c PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 20 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 PA+ +S LLG+W G+G+G YPTI F+Y EE+ F H G KP + YTQ+T + G+P+H+E+GY R G +E+V+A +G+ E++ GTY+ VI+L+ L A +V + R + + EL Y +QM L+ HL AVL + Sbjct: 7 PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y302_MYCGI (UPF0678 fatty acid-binding protein-like protein Mflv_0302 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_0302 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.275e-23 Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 2 Query: 8 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKG------TYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 VP+HP + ++ LLG W G+G+G YPT+ +F Y EE+ F H GKP ++Y Q+T G P+H+E+GY R +E ++A TG+ E+ +G T + I ++S VG ++ +EVS R EL L Y V+MA + L+ HL AVL + Sbjct: 5 VPLHPDVVALAPLLGVWVGEGTGEYPTVPSFAYTEEITFGHV-GKPFLSYVQRTRAADDGRPLHSETGYVRSPAPHCVEWILAHPTGITEILEGILERIVTGEGDTLRIDVESTAVGRSASAKEVSAVGRTIELAGDTLTYSVRMAAVGM-PLQHHLSAVLHR 165
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y4114_NOCFA (UPF0678 fatty acid-binding protein-like protein NFA_41140 OS=Nocardia farcinica GN=NFA_41140 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22 Identity = 62/160 (38.75%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 8 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYW-RPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKL--QSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 V +HP IA ++ LLGTWRG G G YPTI +FDY EE++F H G+P + Y Q+T PMHAE+GY RP PD +E+++A TG+ E+ +G+ + +++ S +G +S + V+ R F + + Y ++MA L HL A LR+ Sbjct: 11 VALHPDIAALAPLLGTWRGAGHGQYPTIESFDYHEEISFGHL-GRPFLTYRQRTRAADGSRPMHAETGYLRRPRPD-HVELILAHPTGITEICEGSLTIADGELRMDFDSTHIGRSSTAKLVTALGRSFRVAGDTIEYSLRMAAVG-EPLTHHLAATLRR 167
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y442_STRGG (UPF0678 fatty acid-binding protein-like protein SGR_442 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=SGR_442 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 17 HPAIAPISYLLGTWRGQGSGGYPTINA-FDYGEELNFTHSGGKPVIAYTQKTWKL-GSGEPMH---AESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 HP +AP++ LGTWRG GSGGYPT++A F Y +E+ F+H G+P +AY + W L G+P+ E+G+WR PDG +E +I Q TG+ E+ G +A + + L +E V A +EV R + L + + V L+ HL A LR+ Sbjct: 23 HPLLAPVTGYLGTWRGTGSGGYPTLDADFSYAQEVTFSHD-GRPFLAYEARAWLLDADGQPLRPSARETGWWRLQPDGRVEALITQPTGIAEISVG--HARDGAVDLATERVALAPTAKEVDATRRRYTLTDPDTLTFVHDLAAVGRPLQHHLSARLRR 178
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y1006_MYCLE (UPF0678 fatty acid-binding protein-like protein ML1006 OS=Mycobacterium leprae GN=ML1006 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.792e-21 Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 20 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNA-----EEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 P + ++ LLG+W G+G G YPTI F+Y EE+ F+H +P + YTQKT + G+P+HAE+GY R G IE+V+A + + E++ GTY+ E +++ LV A +V + R F + E Y VQM L+ HL AVL + Sbjct: 7 PDLQALAPLLGSWVGRGMGKYPTIQPFEYLEEVVFSHLD-RPFLTYTQKTRAITDGKPLHAETGYLRVPQPGHIELVLAHHSDIAEIEVGTYSVTGDLIEVELVTTTIGLVPTAKQVTALGRFFRIDGDEFAYSVQMGAVG-QPLQDHLVAVLHR 159
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y6164_FRASN (UPF0678 fatty acid-binding protein-like protein Franean1_6164 OS=Frankia sp. (strain EAN1pec) GN=Franean1_6164 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 8 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS-------GEPMHAESGYWR-------PNPDGS------IEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELV----NGELRYVVQMATNHLTSLRPHLKAVLRK 469 V +HP++ P+++L+GTWRG+G GGY + +F YG+E+ F + G+P + Y TW G PM E+G+WR P PDG +EV++A G+ E+ GT I L S ++ + REV+R L G+L Y + M L+ HL A L + Sbjct: 37 VDLHPSLLPLAFLVGTWRGEGVGGYEGMESFHYGQEITFA-ADGRPALGYVSHTWWADEPRDGREPGSPMATETGFWRVQPPATEPGPDGKVNGSPVVEVMLAHPFGIAEIYVGTVTGTR--IDLDSNVLIRTATAREVTRSVRLYGLIEGGDLAYAIDMEAGG-KPLQSHLSARLHR 210
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y5653_RHOSR (UPF0678 fatty acid-binding protein-like protein RHA1_ro05653 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro05653 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20 Identity = 59/155 (38.06%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVG---NASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 469 V A+AP + G WRG+G G YPTI+ F Y EE+ F +G KP +AY +T + GSG P+H+ESG+ R + E+++AQ TG E+ +G E I+L ++ +A V + R + G+L Y + MA + LT L HL LR+ Sbjct: 28 VPSALAPFA---GLWRGEGEGAYPTIDDFAYTEEIEFAPTG-KPFLAYRSRTREAGSGRPLHSESGFLRLVGEDEAELLVAQPTGFTEIHRG--QVREGTIELSMVVLSASPDAKPVHSIRRQLSVRGGDLTYDLWMA-HDLTPLTHHLHGHLRR 175
BLAST of CN184535 vs. ExPASy Swiss-Prot
Match: Y4252_NOCSJ (UPF0678 fatty acid-binding protein-like protein Noca_4252 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=Noca_4252 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.854e-18 Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 14 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL-GSGEPMH---AESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVL 463 +HP P+++LLG W G+G G YPTI F YG+EL FTH G+P Y + W + +GE + E+G+ R P+G +E+++ +TG EV G A + ++L ++ V +E + R++ V G+L Y MA L+PHL A L Sbjct: 9 LHPDCGPVAWLLGRWGGRGHGDYPTIEGFQYGQELVFTHD-GRPFFHYFARAWIVDDAGEKVREAAQEAGFLRCKPEGRVELLLTHNTGFAEVWYG--EAADGKLELTTDAVVRTESAKEYTGGKRLYGNVEGDLLYAYDMAAMG-QPLQPHLWARL 161 The following BLAST results are available for this feature:
BLAST of CN184535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184535 ID=CN184535; Name=CN184535; organism=Citrus sinensis; type=EST; length=606bpback to top |