CN184531

Overview
NameCN184531
Unique NameCN184531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1211..1847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = -1
Query:  425 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 637
            +Y TGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EK Q
Sbjct:  322 TYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEKAQ 392          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = -1
Query:  425 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 637
            +YGTGKIPDKEIL IVKE FDFRPGM+ I+LDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EKPQ
Sbjct:  322 TYGTGKIPDKEILNIVKEKFDFRPGMIAISLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKSEKPQ 392          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32
Identity = 62/69 (89.86%), Postives = 68/69 (98.55%), Query Frame = -1
Query:  431 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 637
            +YGTGKIPD+EILKIVKE+FDFRPGM++INLDL RGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  297 TYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = -1
Query:  434 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 637
            +YGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKW+
Sbjct:  323 TYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWD 390          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = -1
Query:  434 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 637
            +YGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKW+
Sbjct:  323 TYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWD 390          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = -1
Query:  422 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 637
            +YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLKW+K  A
Sbjct:  322 TYGTGKIPDKEILKIVKETFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDTDFTWEVVKPLKWDKVHA 393          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 63/72 (87.50%), Postives = 69/72 (95.83%), Query Frame = -1
Query:  422 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 637
            +YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK +A
Sbjct:  322 TYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEKVEA 393          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = -1
Query:  422 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 637
            +YGTGKIPDKEIL+IVKE+FDFRPGM+ INLDLKRGG+GR+LKTAAYGHFGRD  DFTWEVVKPLKWEKP A
Sbjct:  325 TYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEKPSA 396          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32
Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = -1
Query:  422 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 637
            SYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  322 SYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32
Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = -1
Query:  422 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 637
            +YGTGKIPDK+ILKIVKE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  322 TYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
The following BLAST results are available for this feature:
BLAST of CN184531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
METK4_VITVI1.911e-3291.55S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK2_POPTR1.911e-3290.14S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK1_PEA1.911e-3289.86S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK5_POPTR2.496e-3291.18S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_POPTR2.496e-3291.18S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK_GOSHI3.261e-3287.50S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK2_CATRO4.258e-3287.50S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK4_HORVU5.562e-3286.11S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK4_ARATH5.562e-3290.28S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_SUASA5.562e-3286.11S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184531 ID=CN184531; Name=CN184531; organism=Citrus sinensis; type=EST; length=637bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGA
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