CN184531

Overview
NameCN184531
Unique NameCN184531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = -1
Query:  437 YGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 634
            YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  335 YGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = -1
Query:  437 YGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 634
            YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  335 YGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = -1
Query:  437 YGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 634
            YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  335 YGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = -1
Query:  455 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEV 637
            ++GTGKIP+ +I+++++  FD RP  +   LDL R     + +TA+YGHFGRD+P+FTWEV
Sbjct:  318 TFGTGKIPEAKIVELIQAHFDLRPKGIVNMLDLLRP---IYTRTASYGHFGRDEPEFTWEV 375          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -1
Query:  458 GTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 631
            GTG IPD++I K+V+E FD RP  +   LDL R   G   KTAAYGHFGR++P+F+WE
Sbjct:  319 GTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLRPIYG---KTAAYGHFGREEPEFSWE 373          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  458 SYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 637
            ++GTG +P  EI +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  319 TFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLRP---IYRKTAAYGHFGRELPEFTWE 375          
BLAST of CN184531 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = -1
Query:  437 YGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 634
            YGT +  ++E+L+IVK +FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  335 YGTSQKSERELLEIVKNNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
The following BLAST results are available for this feature:
BLAST of CN184531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
METK2_MOUSE7.068e-1151.52S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA7.068e-1151.52S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN7.068e-1151.52S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_THIDA9.231e-1149.18S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_RALSO9.231e-1156.90S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_PELCD9.231e-1153.33S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK2_RAT9.231e-1151.52S-adenosylmethionine synthetase isoform type-2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184531 ID=CN184531; Name=CN184531; organism=Citrus sinensis; type=EST; length=637bp
TTTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGA
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