CN184530

Overview
NameCN184530
Unique NameCN184530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_ANAD2 (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=metK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.141e-43
Identity = 87/137 (63.50%), Postives = 102/137 (74.45%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            + FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DETPE M
Sbjct:    4 QDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELM 132          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.141e-43
Identity = 88/135 (65.19%), Postives = 103/135 (76.30%), Query Frame = 3
Query:   12 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E M
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAM 138          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.141e-43
Identity = 88/135 (65.19%), Postives = 103/135 (76.30%), Query Frame = 3
Query:   12 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E M
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAM 138          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.543e-43
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 3
Query:   12 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E M
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECM 151          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.321e-43
Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 3
Query:    3 TETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFM 416
            +E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+V    G D D+C VLV++++QSPDIAQGV      R  D      IGAGDQG MFGYA +ETPE M
Sbjct:    2 SERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELM 145          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.321e-43
Identity = 85/142 (59.86%), Postives = 104/142 (73.24%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETPEFM 416
            + + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FM
Sbjct:    5 KNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFM 146          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 4.338e-43
Identity = 88/135 (65.19%), Postives = 102/135 (75.56%), Query Frame = 3
Query:   12 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E M
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAM 138          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.665e-43
Identity = 87/143 (60.84%), Postives = 103/143 (72.03%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFM 416
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+S+VACET   T +V+VFGEI+TKA VD +K+VR T + IG+     G D D+C VLV I++QSPDIAQGV      R  D      IGAGDQG MFGYA +ETPE M
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLAQDPDSRVACETSVTTGLVLVFGEISTKAYVDIQKVVRQTIKEIGYTDGQYGFDGDNCAVLVAIDEQSPDIAQGVDDSLETREGDADPLDQIGAGDQGLMFGYAVNETPELM 145          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_VIBSL (S-adenosylmethionine synthetase OS=Vibrio splendidus (strain LGP32) GN=metK PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.153e-42
Identity = 88/134 (65.67%), Postives = 102/134 (76.12%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA +EQDP+++VACET  KT MVMV GE+TT A VD E+I R+T R IG+V  D+G DAD C VL  I +QSPDI QGV       P+D GAGDQG MFGYAT+ETP  M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDADSCAVLNTIGKQSPDINQGVD---KADPKDQGAGDQGIMFGYATNETPILM 135          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.180e-42
Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFM 416
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDETPE+M
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYM 145          
The following BLAST results are available for this feature:
BLAST of CN184530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ANAD21.141e-4363.50S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK4_CAEEL1.141e-4365.19Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.141e-4365.19Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK1_BOVIN2.543e-4364.44S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_LACPL3.321e-4359.72S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_BRAHW3.321e-4359.86S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK5_CAEEL4.338e-4365.19Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_LACBA5.665e-4360.84S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_VIBSL2.153e-4265.67S-adenosylmethionine synthetase OS=Vibrio splendid... [more]
METK_LACRJ8.180e-4258.74S-adenosylmethionine synthetase OS=Lactobacillus r... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184530 ID=CN184530; Name=CN184530; organism=Citrus sinensis; type=EST; length=418bp
AGACGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCC
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