CN184530

Overview
NameCN184530
Unique NameCN184530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.044e-41
Identity = 87/136 (63.97%), Postives = 102/136 (75.00%), Query Frame = 3
Query:    9 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   M
Sbjct:    3 TYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLM 135          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_VIBHB (S-adenosylmethionine synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metK PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.181e-40
Identity = 86/134 (64.18%), Postives = 101/134 (75.37%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GE+TT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEILM 135          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.543e-40
Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 3
Query:    3 TETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR----PEDIGAGDQGHMFGYATDETPEFM 416
            TE  LFTSESV+EGHPDK+ DQ+SDA+LDA LE+DP ++VACET   T +V+VFGEI+T A VD +KIVR T + IG+     G D +   VLV I++QSPDIAQGV      R     +DIGAGDQG MFG+A DETPE M
Sbjct:    2 TERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGAGDQGLMFGFAVDETPELM 143          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHEWM (S-adenosylmethionine synthetase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=metK PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.015e-40
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GE+TT A VD E+I R+T R IG+   D+G DAD C +L  I +QSPDI QGV       P++ GAGDQG MFGYA +ET  FM
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRNTVREIGYTHSDMGFDADSCAILNVIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETDVFM 135          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_TREPS (S-adenosylmethionine synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=metK PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.632e-40
Identity = 87/138 (63.04%), Postives = 100/138 (72.46%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-PEDIGAGDQGHMFGYATDETPEFM 416
            ETF FTSESV+EGHPDKLCDQISDAVLDACL QDP S VACET   T+++++ GEI+T+A ++  +I RD    IG+VS DVGLDA    VL     QSPDIAQGVHG   K      GAGDQG MFG+A  ETPEFM
Sbjct:    2 ETF-FTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGAGDQGIMFGFACRETPEFM 138          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_TREPA (S-adenosylmethionine synthetase OS=Treponema pallidum GN=metK PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.632e-40
Identity = 87/138 (63.04%), Postives = 100/138 (72.46%), Query Frame = 3
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-PEDIGAGDQGHMFGYATDETPEFM 416
            ETF FTSESV+EGHPDKLCDQISDAVLDACL QDP S VACET   T+++++ GEI+T+A ++  +I RD    IG+VS DVGLDA    VL     QSPDIAQGVHG   K      GAGDQG MFG+A  ETPEFM
Sbjct:    2 ETF-FTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGAGDQGIMFGFACRETPEFM 138          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_VIBCM (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.437e-40
Identity = 86/134 (64.18%), Postives = 99/134 (73.88%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   M
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLM 136          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_VIBCH (S-adenosylmethionine synthetase OS=Vibrio cholerae GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.437e-40
Identity = 86/134 (64.18%), Postives = 99/134 (73.88%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   M
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLM 136          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_VIBC3 (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.437e-40
Identity = 86/134 (64.18%), Postives = 99/134 (73.88%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   M
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLM 136          
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHEAM (S-adenosylmethionine synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.437e-40
Identity = 86/134 (64.18%), Postives = 99/134 (73.88%), Query Frame = 3
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E++ R T R IG+V  D+G DAD C VL  I +QSPDI QGV       P + GAGDQG MFGYA++ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLSAIGKQSPDINQGVD---RADPREQGAGDQGLMFGYASNETDVLM 135          
The following BLAST results are available for this feature:
BLAST of CN184530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PHOLL9.044e-4163.97S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_VIBHB1.181e-4064.18S-adenosylmethionine synthetase OS=Vibrio harveyi ... [more]
METK_ENTFA1.543e-4059.15S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_SHEWM2.015e-4063.43S-adenosylmethionine synthetase OS=Shewanella wood... [more]
METK_TREPS2.632e-4063.04S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_TREPA2.632e-4063.04S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_VIBCM3.437e-4064.18S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_VIBCH3.437e-4064.18S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_VIBC33.437e-4064.18S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_SHEAM3.437e-4064.18S-adenosylmethionine synthetase OS=Shewanella amaz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184530 ID=CN184530; Name=CN184530; organism=Citrus sinensis; type=EST; length=418bp
AGACGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCC
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