CN184530

Overview
NameCN184530
Unique NameCN184530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_YERPE (S-adenosylmethionine synthetase OS=Yersinia pestis GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GE+TT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV     + P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RENPLEQGAGDQGLMFGYATNETSVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_YERPB (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GE+TT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV     + P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RENPLEQGAGDQGLMFGYATNETSVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GE+TT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV     + P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RENPLEQGAGDQGLMFGYATNETSVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 85/134 (63.43%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GE+TT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV     + P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RENPLEQGAGDQGLMFGYATNETSVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHISS (S-adenosylmethionine synthetase OS=Shigella sonnei (strain Ss046) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHIFL (S-adenosylmethionine synthetase OS=Shigella flexneri GN=metK PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHIF8 (S-adenosylmethionine synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHIDS (S-adenosylmethionine synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHIBS (S-adenosylmethionine synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_SHIB3 (S-adenosylmethionine synthetase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.657e-40
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:   15 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   M
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLM 135
The following BLAST results are available for this feature:
BLAST of CN184530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPE7.657e-4063.43S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPB7.657e-4063.43S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPA7.657e-4063.43S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP37.657e-4063.43S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_SHISS7.657e-4064.18S-adenosylmethionine synthetase OS=Shigella sonnei... [more]
METK_SHIFL7.657e-4064.18S-adenosylmethionine synthetase OS=Shigella flexne... [more]
METK_SHIF87.657e-4064.18S-adenosylmethionine synthetase OS=Shigella flexne... [more]
METK_SHIDS7.657e-4064.18S-adenosylmethionine synthetase OS=Shigella dysent... [more]
METK_SHIBS7.657e-4064.18S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHIB37.657e-4064.18S-adenosylmethionine synthetase OS=Shigella boydii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184530 ID=CN184530; Name=CN184530; organism=Citrus sinensis; type=EST; length=418bp
AGACGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCC
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