CN184530

Overview
NameCN184530
Unique NameCN184530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.917e-71
Identity = 126/137 (91.97%), Postives = 129/137 (94.16%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            ETFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACETCTKTNMVMVFGEITT AKVDYEKIVR TCR IGF+S DVGLDAD C VLVNIEQQSPDIAQGVHGH TK+PEDIGAGDQGHMFGYATDETPE M
Sbjct:    2 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 6.422e-71
Identity = 123/137 (89.78%), Postives = 132/137 (96.35%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFLFTSESVNEGHPDKLCDQ+SDA+LDACL+QDPESKVACE+CTKTNMVMVFGEITTKA+V+YEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE M
Sbjct:    2 DTFLFTSESVNEGHPDKLCDQVSDAILDACLKQDPESKVACESCTKTNMVMVFGEITTKAQVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.431e-70
Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            ETFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQS DIAQGVHGHF+KRPE+IGAGDQGHMFGYATDETPE M
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELM 139
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.431e-70
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFL+TSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIV  TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDETPE M
Sbjct:    2 DTFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.868e-70
Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            E+FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYE+IVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE++GAGDQGHMFGYATDETPE M
Sbjct:    2 ESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.868e-70
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFL TSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVR TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDETPE M
Sbjct:    2 DTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.440e-70
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDETPE M
Sbjct:    6 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELM 142
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 3.187e-70
Identity = 123/137 (89.78%), Postives = 130/137 (94.89%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPESKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE M
Sbjct:    2 DTFLFTSESVNEGHPDKLCDQVSDAILDACLAQDPESKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 4.163e-70
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFLFTSESVNEGHPDKLCDQISDAVLDACL QD ESKVACETCTKTN+VMVFGEITTKA VDYEKI RDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETPE M
Sbjct:    2 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELM 138
[Close]
BLAST of CN184530 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 2.066e-69
Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 3 
Query:    6 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFM 416
            +TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDETPE M
Sbjct:    6 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELM 142
The following BLAST results are available for this feature:
BLAST of CN184530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ARATH4.917e-7191.97S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_ACTCH6.422e-7189.78S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK5_POPTR1.431e-7091.97S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK1_DAUCA1.431e-7091.24S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK4_ARATH1.868e-7090.51S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_DAUCA1.868e-7091.97S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK3_ATRNU2.440e-7091.24S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_POPTR3.187e-7089.78S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK_MESCR4.163e-7091.24S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK4_ATRNU2.066e-6990.51S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184530 ID=CN184530; Name=CN184530; organism=Citrus sinensis; type=EST; length=418bp
AGACGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCC
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