CN184525

Overview
NameCN184525
Unique NameCN184525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.549e-16
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 510
            C  VTG+L PC+ +LR+GG+ P P CC G + L GA RT  DR+ AC C K A   +  +  ++A+ LP +CG+S    I+PN +C+ +
Sbjct:   29 CNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.023e-16
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 510
            CGQV  SLA CI FL  G   P   CC GV++L   A T+ DR+AAC C+K A    P I  + A+ LP++CGV I   IS  T+C  +
Sbjct:    3 CGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.450e-14
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 510
            C  V   L PC+++L +G   PP  CC+GV+SL  A  T+ D++AAC C+K    S+  +   +A  L   CG S+P   SP  DC+ V
Sbjct:   28 CSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14
Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = -2
Query:  241 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYR--SIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 510
            C  V  +L PC+ ++  GG  P   CCNG+R L+  A +  D+Q  C C+K      S   I    AA LP +CGV +PYKI P+T+C+ ++
Sbjct:   26 CNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVS-IPYKISPNTDCSRV 510
            C QV  ++ PC  +L      P   CC  +R L+   + TPDRQA CNCLK   +S  G+    AA LP  C V+ +   ISPN DCS+V
Sbjct:   34 CNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = -2
Query:  241 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI---PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 510
            C  V   L PC++++  GG  P   CCNG+ +L   A+T+ DRQ  C C+K A   +   P    N A  LP +CGV +PYK SP+TDC  ++
Sbjct:   23 CNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQN-ALELPSKCGVDLPYKFSPSTDCDSIQ 113          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 35/89 (39.33%), Postives = 46/89 (51.69%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 510
            CGQV  +L+ C+ FL      P   CC GV  L   A T  D++ AC C+K A    P I  + A+ LP +CGV I   IS  T+C  +
Sbjct:    3 CGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = -2
Query:  253 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISP---NTDC 510
            CG V G+L PC+ F++   + P   CC+G + L+G  +T P R  AC C++ A ++   I+  + + +P+ CG+ +  K+ P   N DC
Sbjct:   40 CGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPPIDVNMDC 127          
BLAST of CN184525 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11
Identity = 28/90 (31.11%), Postives = 52/90 (57.78%), Query Frame = -2
Query:  244 CGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY-KISPNTDCSRV 510
            CG+V   + PC+ F++   + P   CC+G + L+   +TT  ++ AC C+  A + I GI   + A +P++CG++     I+ + DCS++
Sbjct:   35 CGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124          
The following BLAST results are available for this feature:
BLAST of CN184525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
NLTP1_HELAN1.549e-1642.70Non-specific lipid-transfer protein AP10 OS=Helian... [more]
NLTPA_RICCO2.023e-1646.07Non-specific lipid-transfer protein A OS=Ricinus c... [more]
NLTP8_ARATH1.450e-1439.33Non-specific lipid-transfer protein 8 OS=Arabidops... [more]
NLTPA_ARATH3.230e-1439.13Non-specific lipid-transfer protein 10 OS=Arabidop... [more]
NLTP_PINTA5.510e-1442.22Non-specific lipid-transfer protein OS=Pinus taeda... [more]
NLTP6_ARATH5.510e-1440.86Non-specific lipid-transfer protein 6 OS=Arabidops... [more]
NLTPB_RICCO3.023e-1239.33Non-specific lipid-transfer protein B OS=Ricinus c... [more]
NLT13_PARJU2.559e-1133.71Probable non-specific lipid-transfer protein 1 OS=... [more]
NLT22_PARJU4.365e-1131.11Probable non-specific lipid-transfer protein 2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K11_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184525 ID=CN184525; Name=CN184525; organism=Citrus sinensis; type=EST; length=511bp
GAGGTAAGGGAGAATTTTTAAGATAATACCACAAAATAACTAGAATTAAT
CACTCAAAACACAGATCACGTTTACATATTTAATATGATATTAAAAGCAA
AGATACAAACATGACATGAGAGTGAGACTCACACAAGTGGAGACTCGTTC
GGACAAAGAAATTAACATATATATTCTTTATTTATTTATTCTTCTCAGTC
AATCATACTTGGAAAGTCACAGAGCTCAAACTCAACTTCACCTGACCCTA
GAGCAGTCAGTGTTGGGGCTGATCTTGTAAGGAATGCTGACTCCACATTG
ACGAGGAAGGCCAGCGGCAACATTAGCGTTGATGCCGGGGATTGATCGGT
AAGCTTGCTTCAAGCAGTTGCATGCAGCTTGGCGGTCAGGGGTGGTTCTG
GCGGCGCCGTTGAGAGACCTGACGCCGTTACAGCATGGGGGTGGAGGAAA
ACGCCCTCCAGTTCTCAAGAAAGCGATGCATGGAGCCAAGGAGCCTGTCA
CCTGCCCACAT
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