CN184511

Overview
NameCN184511
Unique NameCN184511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN184511_ssr306 microsatellite CN184511_ssr306:306..315. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2429 contig Csv1_Contig2429:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = -1
Query:  350 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN---EPVDMGERLGLTMEKSQPFEVLVTP 718
            E   E  +NGY +   T L++NVW I RD   W++   F PERF+  +  ID KGQNFELLPFGSGRR+CPG+     +++F LA++L  FD+  P     E +DM E  GL + K    E+L+ P
Sbjct:  373 EVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNN--IDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKN--ELLLVP 494          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = -1
Query:  350 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN-EP--VDMGERLGLTMEKSQPFEVLVTP 718
            E REE  +NGY +P  T++ +NVW + RD   W++   F+PERF      ID  G NFE LPFG GRR+CPG+SF L  +   LA LL  FD+  P+  EP  +D+ E  G+T  +     ++ TP
Sbjct:  374 ECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERF--EQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATP 497          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = -1
Query:  359 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN---EPVDMGERLGLTMEKSQPFEVL 718
            E+ ++  + GY++P  T + +N+W I R+ +VW++P  F PERF+     ID KG NFELLPFGSGRR+CPG+   + ++  TL +LL  FD+  P       VD+ E  GL   K  P +++
Sbjct:  369 EASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMD--SQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLI 489          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 49/122 (40.16%), Postives = 82/122 (67.21%), Query Frame = -1
Query:  359 HESREECTVNGYHVPAGTQLFINVWKIQRDASVW-EEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVDMGERLGLTMEKSQPFEVL 721
            H+S ++  +   H+PAGTQ+ +N+W + R+A+ W  + ++F+PER L    D   +GQ+FEL+PFG+GRRMCPG+SFA+ + +  LA+L+ GFD+ +  +E  D+ E +G  + +  P  V+
Sbjct:  360 HQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDF--RGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDE-TDVAESIGSVIRRMHPLYVI 478          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = -1
Query:  341 ECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKD----IDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDF--ATPSNE-------PVDMGERLGLTMEKSQPFEVLVTPRLS 706
            ECTV  Y +P  + LF+NVW I R+   W+ P +F+PERFL    D    +DV+G +F+LLPFGSGRRMCPGVS A+Q +   L +++Q FDF    P  E        +++ ER GLT  ++     +   R S
Sbjct:  379 ECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLTAPRAHNLVCVPVDRTS 513          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.926e-22
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = -1
Query:  353 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATP---SNEPVDMGERLGLTMEKSQPFEVLVT 718
            E+  + T+ GY VPA T++F+N W I RD + W  P +F P+RF+    D+D  G +FEL+PFG+GRR+CPG++     + FTLA+LL  +D+A P     E V M E   LT  +  P  V+ T
Sbjct:  401 ETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVG--SDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVPT 523          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.926e-22
Identity = 52/127 (40.94%), Postives = 76/127 (59.84%), Query Frame = -1
Query:  341 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATP-SNEPVDMGERLGLTMEKSQPFEVLVTPRLS 718
            E+  +  + GY +P    L +N W I RD   W+ P +F PERF+     +D KG +FELLPFGSGRR+CPG++ A+  ++  L +LL  FD+  P   + +DM E   LT++K  P E+L   R+S
Sbjct:  379 ETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDC--PVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLPVIRIS 503          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = -1
Query:  350 ECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN---EPVDMGERLGLTMEKSQPFEVLVTP 706
            E  +N Y +P  T+L++NVW I RD   W++P +F PERF+  +  ID KGQ+FELLPFGSGRRMCP +     +++F LA++L  FD+  P     E +D+ E  GL   K    E+++ P
Sbjct:  377 EFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFV--NSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKN--ELVLVP 494          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22
Identity = 50/121 (41.32%), Postives = 78/121 (64.46%), Query Frame = -1
Query:  359 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATP-SNEPVDMGERLGLTMEKSQPFEVL 718
            E+  +  + GY++P+ T L +NVW I RD   W+ P +F PERF+     ID KG +FE+LPFGSGRR+CPG++FA+  ++  L +LL  FD+  P  ++ +DM E   +T+ K  P +++
Sbjct:  375 ETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDC--PIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPLKLV 493          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22
Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = -1
Query:  413 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVD 718
            E+     + GY +PA TQ+ INV+ I RD  +W  P +F P+RFL     ID KG NFELLPFGSGRR+CPG++  + +++F L +LL  FD+  P  E  D
Sbjct:  373 ETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLD--SSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEKEEAD 472          
The following BLAST results are available for this feature:
BLAST of CN184511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
C71B9_ARATH7.701e-2344.44Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71D7_SOLCH1.006e-2242.86Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BC_ARATH1.006e-2240.65Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.006e-2240.16Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC1.314e-2242.22Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71E1_SORBI2.926e-2242.404-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71B4_ARATH2.926e-2240.94Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BX_ARATH3.822e-2243.44Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH3.822e-2241.32Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH6.519e-2247.06Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184511 ID=CN184511; Name=CN184511; organism=Citrus sinensis; type=EST; length=721bp
CAAAGGATGGTTTTATTACTGGAAGAGAGAATACAAGGTTTCATCCAAGT
ATTCTTACTACAACTCTATATTATAAGACTCCAGGACTCAATGATCCAAC
ACACTCTTAGGGAATTCCTTTTATAGGCACTAAAGGAATCTCCTTTTATT
ATTTCAATCATTACATCTTATCTATAGGGAATCTACTTTATGACTCATCA
CTTCTTTATATTGCATCACACAGTACATCCTTATCTCTAAGGAATTGACT
TTACAACTCACTACATGTGACACCACACACTTGTTACTTATTTATTGTTC
AATCCATATATATATAATCAATTTAACCATAGAAGGCAGCAGAAAGACGT
GGAGTAACAAGTACTTCAAATGGTTGAGATTTCTCCATGGTCAACCCTAA
TCTTTCACCCATGTCCACCGGTTCATTAGATGGGGTTGCAAAATCAAATC
CCTGAAGTAGAGAAGCAAGTGTAAATTGCATAACTTGGAGGGCAAATGAC
ACTCCAGGACACATTCTTCTACCACTACCAAAAGGTAACAATTCAAAATT
TTGTCCCTTAACATCAATATCCTTGTGCCTTGTCAAAAATCTTTCTGGCT
GAAACTTAGATGGCTCTTCCCAGACACTTGCATCACGTTGAATTTTCCAT
ACATTGATAAAAAGTTGTGTGCCAGCAGGGACATGGTAACCATTAACTGT
GCACTCTTCCCTAGACTCATG
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