CN184510

Overview
NameCN184510
Unique NameCN184510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 2
Query:  104 LLRKCIGKKRRGAPEAGGAW--PVIGHL-HLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            L RK   KKRR      G W  P++G L HLLR    P      +A KYGP+  +R G+   +++S+   A+E L   D  FA+RP  L  EI  Y      F+PYG+YWR  RK+ T+ELL+   + +L  +R+ E
Sbjct:   25 LTRKSSSKKRRPP----GPWNLPLVGGLLHLLRSQ--PQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGE 155          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 2
Query:  125 KKRRGAPEAGGAWPVIGHLHLLRGP-EPPYRVFGRMADKY--GPIFNIRIGKNPALIVSNWEIA-KECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            KK+   P   G  P+IGHL LL+ P     R F    D    G + ++R+G     +VS+ ++A +EC   +D V ANRP+ +  + +GYN +  + +PYG +WR  R++ T+E+ + HRL    +VR  E
Sbjct:   29 KKQNLPPSPPGWLPIIGHLRLLKPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDE 159          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  164 PVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            PVIGHLHLL G  PP  +   +A +YGP+ ++++G+  ++++S+ E AK+ +   D  FA+R  ++   I+ Y+    +FSPY  +W + RKI   ELL+   +     +R+ E
Sbjct:   39 PVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEE 152          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 48/126 (38.10%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  128 KRRGAPEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            +RR  P     WPVIG L LL G   P+    +MA KYGPI  +++G    ++ S    AK  L T D  F+NRP       + YN    VF+PYG  W+  RK++ L +L    LE   +VR  E
Sbjct:   32 RRRRLPPGPEGWPVIGALPLLGGM--PHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANE 155          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 42/127 (33.07%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  125 KKRRGAPEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            K ++  P +    PVIGHLH L G  P + VF  +A KYGP+ ++++G+  ++++S+ E AK+ +   D  FA+R   +    + Y+    +FSPY  +WR+ R+I   ELL+   +    ++R+ E
Sbjct:   29 KSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEE 154          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 42/127 (33.07%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  125 KKRRGAPEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            K ++  P +    PVIGHLH L G  P + VF  +A KYGP+ ++++G+  ++++S+ E AK+ +   D  FA+R   +    + Y+    +FSPY  +WR+ R+I   ELL+   +    ++R+ E
Sbjct:   29 KSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEE 154          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 42/115 (36.52%), Postives = 72/115 (62.61%), Query Frame = 2
Query:  164 PVIGHLHLLRGPEPPYRVFGRMADKYGP-IFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            P+IGHLHL+   + PY     +A +YGP +  +R+G  P ++VS+  +A+  L T+D VF++RP++L  +I+ Y  +   F+PYG ++R+ RK+ T+ LL   ++   +  RE E
Sbjct:   76 PIIGHLHLMG--DIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEE 188          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 2
Query:  143 PEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGP--IFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            P   G  P++GHLH + GP+    +   +A KYG      +R G  P LIVS+   A+  + THD + A+RP ++A  IL YN     FSP G YW++TRK+    LL+N ++   +H RE E
Sbjct:   58 PSPPGTLPIVGHLHHI-GPQTHISLQELVA-KYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEE 178          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 42/134 (31.34%), Postives = 74/134 (55.22%), Query Frame = 2
Query:  104 LLRKCIGKKRRGAPEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            +  K I + ++  P      P+IG+LH L+G    ++    ++ K+GP+ ++R+G  P +++S+ E A+E L THD    +RP T+A  +   N     F  YG  WRE RK++  E  +  +++  K++RE E
Sbjct:   20 IFTKKIKESKQNLPPGPAKLPIIGNLHQLQGLL--HKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEE 151          
BLAST of CN184510 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 5.814e-16
Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   83 SFLVSRNLLRKCIGKKRRGAPEAGGAWPVIGHLHLLRGPEPPYRVFGRMADKYGPIFNIRIGKNPALIVSNWEIAKECLTTHDKVFANRPKTLAMEILGYNFSMFVFSPYGSYWRETRKIATLELLANHRLEKLKHVREYE 505
            +FL  + LL++    K +  P +    PVIG+LH L GP P +R    ++ +YGP+  +  G+ P L+VS  ++  + + THD  FANRPK+ A+ I        +F PYG  W+  + +  + LL N  +   +++RE E
Sbjct:   15 AFLFLKPLLKRITTTKPK-LPPSPWRLPVIGNLHQL-GPNP-HRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEE 152          
The following BLAST results are available for this feature:
BLAST of CN184510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C99A3_ORYSJ3.408e-1638.69Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C81D1_ARATH3.408e-1635.11Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C7D94_MENGR3.408e-1635.09Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C75A2_SOLME3.408e-1638.10Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71DI_MENSP4.451e-1633.07Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR4.451e-1633.07Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71C4_MAIZE4.451e-1636.52Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71C3_MAIZE4.451e-1639.02Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71B4_ARATH4.451e-1631.34Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH5.814e-1633.33Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005K04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184510 ID=CN184510; Name=CN184510; organism=Citrus sinensis; type=EST; length=506bp
AGCAGCCATGGGCATTCTTGTTTTATCTCAAACAAGTGCTGTAGCTGCAA
TTTTAATCACCCTTTTAATCATTCTATACACGTCGTTTCTAGTTTCAAGA
AATTTGCTTAGAAAATGCATAGGCAAGAAGAGAAGGGGAGCACCAGAAGC
AGGTGGAGCTTGGCCAGTGATTGGCCATCTACACCTCTTACGAGGGCCAG
AACCTCCTTACAGGGTGTTCGGCAGAATGGCTGACAAGTATGGACCAATC
TTTAATATCAGGATAGGCAAAAATCCAGCTTTAATCGTGAGTAATTGGGA
GATTGCTAAAGAGTGTCTCACAACACATGACAAAGTCTTTGCCAACCGTC
CGAAAACTCTAGCTATGGAGATTTTAGGCTACAATTTTTCCATGTTTGTC
TTCAGCCCATATGGCTCCTACTGGCGCGAGACACGCAAGATAGCCACACT
TGAGCTTCTCGCAAACCATCGGCTCGAGAAGCTCAAGCACGTACGAGAAT
ACGAGG
back to top