CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB1_CAEEL (Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=F47B10.1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.838e-19 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = -3 Query: 35 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAE 352 +C++L E YF+I LDR T GPI+I S+GG +IE++A P+ IVK+PIDV GIT E A ++ + A E ++KLY++F SD TL+EINP+AE Sbjct: 128 VCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKDCEQQASEIIEKLYQMFKGSDATLVEINPMAE 233
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.678e-18 Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 +CE+ E YFAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S ++ DA Sbjct: 157 VCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDA 273
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB_NEOFR (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.738e-18 Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDE---DAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E+ E YFAI+LDR T GP+++ S+GG IE++A+ P+ I+ VP + G+T E D AK + G K + A + KLYK+F E D T++EINP+AE + ++V DA Sbjct: 131 YVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKM-GFTEKCVPQ--AADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDA 248
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.738e-18 Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 +CE+ E YFAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G + D A E + KLY LF + D T++EINP+ E S +++ DA Sbjct: 157 VCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDA 273
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB1_MACFA (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.883e-18 Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 +CE+ E YFAI ++R GP++IG S+GG +IED+A + P I+ PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ E S ++ DA Sbjct: 157 VCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDA 273
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.377e-18 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 +CE+ E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A ++ + + + A E + KLY F + D T++EINP+ E S ++ DA Sbjct: 157 VCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDA 273
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Trichomonas vaginalis PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.328e-18 Identity = 43/117 (36.75%), Postives = 73/117 (62.39%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 L + + + E+YFAI+LDR+T P++I ++GG IE++A +P I K +D GIT+E A + L ++ + +++KL+KLF SD T +E+NPLAET+ +++ D+ Sbjct: 115 LSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTGKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDS 231
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB2_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.208e-17 Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 + E + + E Y A+++DR++ GP+++ GG IE +AEK P I K PID+ G+T+ + K+ L + A +++K+LY LF D T +EINPL ET+ ++ DA Sbjct: 126 IAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFEGKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDA 242
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_OCHA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA+K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALKLEGQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |