CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_HALSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarium GN=sucC PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA Sbjct: 92 EAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADA 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_HALS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=sucC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA Sbjct: 92 EAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADA 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia cenocepacia (strain HI2424) GN=sucC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++ A DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURCC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia cenocepacia (strain MC0-3) GN=sucC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++ A DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURCA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia cenocepacia (strain AU 1054) GN=sucC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++ A DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_SACEN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=sucC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-12 Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 5 LVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 334 +V+E YF+ +LDR + + +GG IE++A P + K+ ID G+ + A ++VD + +E V KL++ F D TL+EINPL + +++A D Sbjct: 96 IVDEYYFSFLLDRANRNFLAMASVEGGMEIEEVAATKPEALAKIAIDPIQGVDEAKAREIVDAAKFPAEIADQVVEVVVKLWETFVAEDATLVEINPLVKDPQGKIIALD 205
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RICCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia conorii GN=sucC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-12 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++ E YF+I+ DR + I ++GG IE +AEK P+ I+K +D G+ D + L K E VK +Y F E+D T +EINPL S L+A DA Sbjct: 97 YIESGCDILKEYYFSIVFDRSASCITFIASTEGGIDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PARL1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=sucC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-12 Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + S+ E+Y +I++DR T+ I ++GG IE++A+K P I+ +D +GI+ KV L + + ++KLYK F D ++LEINPL T L+ DA Sbjct: 97 YIEDGSSISRELYLSILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFSVDPASGISGFHGRKVAYALGLEGDQVKQGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-12 Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L A + VK LY++F E D +LEINPL L A DA Sbjct: 107 YIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLSGAQVKQCVALVKNLYRMFIEKDMEMLEINPLIVMKDGNLKALDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_MYXXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=sucC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-12 Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E L++ E+Y + LDR T+ + +GG IE++AEK+P I++ +D G D K+ GL N + LY++F ++D +L+EINPL +VA DA Sbjct: 97 YIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGLGLTGPTVNKFTQFCSALYRMFMDTDASLVEINPLVILKDGGVVALDA 214 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |