CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RICPU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia peacockii (strain Rustic) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D +EINPL S L+A DA Sbjct: 97 YIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGHLLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RHOSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DA Sbjct: 107 YIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DA Sbjct: 107 YIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DA Sbjct: 107 YIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DA Sbjct: 107 YIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RHOCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV L + + + +YK F + D +L+E+NPL T +++A DA Sbjct: 106 YVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLEGKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVLALDA 223
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PELPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelobacter propionicus (strain DSM 2379) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = -3 Query: 5 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 346 E + + E+Y +I LDR+++ +I ++GG IE++A P+ I + ID F G+ A + GL + +E + LY+ E DC+L+EINPL T+ LVA D Sbjct: 99 EVVDIERELYLSITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLGLVGPLCEECVELILNLYRCLLERDCSLVEINPLVVTNAGWLVAMD 212
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_HYPNA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR T+ + ++GG IE +A P I+ V ID G+T DAAK+ L + D ++ LYK F E D +LE+NPL L DA Sbjct: 107 YIEDGADIEKELYLSILVDRATSNVAFVVSTEGGMDIEAVAHDTPEKILTVQIDPMAGVTPADAAKINSALNLSGSAAEDGLKLYPILYKAFVEKDMAMLEVNPLIVMKDGHLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ACIC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=sucC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 40/114 (35.09%), Postives = 59/114 (51.75%), Query Frame = -3 Query: 5 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 346 E ++ E+Y I+LDR A + + GG IE++A K P+ I K ID G A ++ L K NDA++ + LYK + ++D +LLEINP T +L A D Sbjct: 103 ETAAIDRELYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPAVGFQAYQARQLAFALGLKPTQINDAVKFMMGLYKAYMDTDASLLEINPFITTKDDKLFALD 216
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_WOLTR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=sucC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.229e-12 Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV--VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E S+ E Y +I++D K + P I S+GG IE++A+ +P IVK+ ID D+ K+ + L+P+ ++ + K +Y F +D +EINPL ET+ +A DA Sbjct: 97 YIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKLSNIFNLSPEQIEKITNV--AKNIYDTFIATDANQIEINPLVETNSGDFIALDA 214 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |