CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_SORC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sorangium cellulosum (strain So ce56) GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 41/120 (34.17%), Postives = 62/120 (51.67%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAK--VVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + L + E+YFA+++DR+ +I ++GG IE++A P I K+ ID G+ + + GL K R ++ V LY F DC+LLEINPL T + A DA Sbjct: 102 YIEQGLDIARELYFAMLVDRERRRIAVIASTEGGMDIEEVAHSTPEKIYKLFIDPVLGLAPYQGRQLAIALGLTAKETQR-QFLKLVASLYACFTAEDCSLLEINPLVVTGAGDVFALDA 220
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_METFK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = -3 Query: 5 LSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK-LYKLFCESDCTLLEINPLAETSGKQLVAAD 340 L + E+Y ++++DR +++ + GG IE++A+ P I++ D NG+ D A + L V D+ A ++ K LY+LF E+D LLEINPL T+ LVA D Sbjct: 102 LPIARELYVSMLVDRSLERVVLVASAAGGMEIEEIAKDSPEKILQEVCDPLNGLVDYQARNIAFALG-LVGDQVAAFTRLAKGLYRLFKENDLALLEINPLIVTAEGALVALD 213
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_MACCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Macrococcus caseolyticus (strain JCSC5402) GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 37/115 (32.17%), Postives = 60/115 (52.17%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y +LDR T +++G +GGT IE++AE P I K ID G+ A ++ + N A++ + LY +F + D +++EINPL T +++A DA Sbjct: 100 EGCDIKKEYYLGFVLDRATDSVVLMGSEEGGTEIEEVAEATPEKIFKEVIDPVVGLMPYQARRLAFNINIPKESVNKAVKIMLGLYDVFMKKDASIIEINPLVTTGDGEVLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_LEPIN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira interrogans GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 36/117 (30.77%), Postives = 61/117 (52.14%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 YL + + + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID G+ A ++ L + +Y+ + + D +LLEINPL T +++A D Sbjct: 101 YLEQGIDIAKEYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFELGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGD 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_LEPIC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 36/117 (30.77%), Postives = 61/117 (52.14%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 YL + + + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID G+ A ++ L + +Y+ + + D +LLEINPL T +++A D Sbjct: 101 YLEQGIDIAKEYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFELGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGD 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_GEOTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 36/115 (31.30%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y +++DR T+ +++G +GGT IE++A K P I K +D G+ A ++ + N A++ + LY++F + DC++ EINPL T +++A DA Sbjct: 100 EGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQARRLAFNINIPKKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_GEOKA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus kaustophilus GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ A ++ + N A++ + LY++F + DC++ EINPL T +++A DA Sbjct: 100 EGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIPKHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DESPS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfotalea psychrophila GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E +S+ E+Y +I++DR+ A II C GG +IE++A P I K+ I+ G + + L + LYKLF + DC+++EINPL T QL+A DA Sbjct: 99 EGVSIARELYLSILVDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHINQAREWLNIAQEQARAFSLFIHALYKLFLDYDCSMVEINPLIITEDNQLIALDA 213
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BACSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis GN=sucC PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A + + LYK F E DC++ EINPL T ++A DA Sbjct: 100 EGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BACFR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides fragilis GN=sucC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 L E +++ E Y + +DR T +I + GG IE++A + P I++ ID G+ D A K L + N ++ LYK F E D +L EINPL T L+A DA Sbjct: 91 LSEAVNIAAEYYISFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQAEQANRMATIIQDLYKAFIEKDASLAEINPLVLTPVGTLLAIDA 207 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |