CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RICB8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia bellii (strain OSU 85-389) GN=sucC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++ E YF+++ DR + I ++GG IE++AEK P I+K +D G+ + A + L K E VK YK F E+D +EINPL L+A DA Sbjct: 97 YIESGCDILKEYYFSVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFKDHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PERMH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=sucC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E ++ E Y AI LDR + II+ S+GG IE++A K P I+ ID F G+ A ++ L N A KLY+L+ + D +++EINPL T +V DA Sbjct: 97 YIEEGTNIDKEFYVAITLDRSKSKLIIMASSEGGMEIEEVAAKNPEAIITEVIDPFLGLRPYQAREIALKLGLPKNLLNKAAGLFVKLYELYMKEDASMVEINPLVLTKEGNIVILDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_LEPBL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=sucC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 YL + + + E Y +I+LDR I++ ++GG IE++AE +P I+K+ +D G+ A ++ L V +Y + + D +LLEINPL T +++A D Sbjct: 101 YLEQGIDIAKEYYLSILLDRSIRKTILMASTEGGMEIEEVAETHPEKILKIAVDPGIGLQVNQARQLAFELGLPAESHKSFQSLVMAIYDAYIKEDASLLEINPLILTKQNEIIAGD 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_LEPBJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=sucC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 YL + + + E Y +I+LDR I++ ++GG IE++AE +P I+K+ +D G+ A ++ L V +Y + + D +LLEINPL T +++A D Sbjct: 101 YLEQGIDIAKEYYLSILLDRSIRKTILMASTEGGMEIEEVAETHPEKILKIAVDPGIGLQVNQARQLAFELGLPAESHKSFQSLVMAIYDAYIKEDASLLEINPLILTKQNEIIAGD 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BEUC1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=sucC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = -3 Query: 5 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 352 + E S+ E YF+++LDR + + +GG IE LA + P + +V +D GI AA++V G A VA + ++KL+ ++ D TL+E+NPL T+ +++A D Sbjct: 94 IAEGASIAEEYYFSVLLDRANRSYLAMASVEGGVEIEQLAVERPEALARVAVDPLVGIDAAKAAEIVAAAGFADDVA--GAVADVIQKLWTVYDAEDATLVEVNPLVRTTDGRVIALD 209
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC1_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Streptomyces coelicolor GN=sucC1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11 Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = -3 Query: 5 LVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 334 +V E Y + +LDR + I +GG IE++A P + K PID +G+T E A ++V+ +VAD+ + + KL+ F + D L+E+NPLA+ ++A D Sbjct: 97 IVEEYYVSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKFPAEVADK--VADILVKLWDTFIKEDALLVEVNPLAKVVSGDVIALD 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_STACT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus carnosus (strain TM300) GN=sucC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.595e-11 Identity = 38/118 (32.20%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E Y ++DR T ++ +GGT IE++A K P I K ID G+ A ++ + N A + + LY +F E DC+++EINPL T ++A DA Sbjct: 97 YIEEGADIKKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETIDPVVGLAPFQARRIAFNINIPKESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.595e-11 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L R DA + LYK F E D +LLE+NPL + ++ DA Sbjct: 107 YIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_MESSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=sucC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.595e-11 Identity = 38/118 (32.20%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ L A D LYK F E D +LLE+NPL +L DA Sbjct: 107 YIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLDGAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_JANMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Janthinobacterium sp. (strain Marseille) GN=sucC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.595e-11 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y +++DR + ++ S+GG IE +AE P I KV ID G+ D +A D +A K+ +I Q + LYK F E+D +L EINPL T ++VA DA Sbjct: 100 EGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPVKGLLDSEA----DDIARKIGVPEGSIGQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVALDA 214 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |