CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUO2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUMB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUC2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BRUA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus (strain S19) GN=sucC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLEINPL + ++ DA Sbjct: 107 YIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC1620.08 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.051e-16 Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+CE+ + E YFAI++DR+ P+I+ +GG IE +A + P+ I+K + + A ++VD L + + A++ + KLYK+F + D T +EINPLAET+ +++ DA Sbjct: 126 YVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDA 243
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DESAH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=sucC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.795e-16 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 2 LVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 334 + E+Y +I++DR TAG +I+ +GG IE +A K P I+KV +D GI +V GL A + +K LY LF ++DC+LLEINPL TS +++A DA Sbjct: 104 IAKELYLSILVDRATAGIVIMASQEGGMDIETVAAKTPEKIIKVRVDPLTGIQGYYLRQVGFGLGLPKAALKEFSALLKNLYTLFVKNDCSLLEINPLILTSDDRVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCB_YEAST (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=LSC2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.737e-15 Identity = 40/107 (37.38%), Postives = 67/107 (62.62%), Query Frame = -3 Query: 35 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAE 355 Y+ +++ +E Y +I++DR+T P+II S+GG +IE++AE+ P+ I K I+ G++ + A V L +++A + V LYK+F E D T +EINPL+E Sbjct: 134 YIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSE 240 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |