CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_WOLWR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E S+ E Y ++++D K + PI I S+GG IE++A+ P IVK ID T D++K+ L+P+ ++ + K +Y F +D + +EINPL ETS +A DA Sbjct: 97 YVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDID---SATSFDSSKLSSSFHLSPEQIEKITNV--AKNIYDAFIATDASQIEINPLVETSSGDFIALDA 211
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_WOLPM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia pipientis wMel GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E S+ E Y ++++D K + PI I S+GG IE++A+ P IVK ID T D++K+ L+P+ ++ I KK+Y F +D + +EINPL ET+ +A DA Sbjct: 97 YVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDID---PATSFDSSKLSSRFHLSPEQIEKISNI--AKKIYDAFIATDASQIEINPLVETNSGDFIALDA 211
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_VEREI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Verminephrobacter eiseniae (strain EF01-2) GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL---APKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E Y +I+ DR T I S+GG IE++ P MI+ +D G+ E A K+ G+ AP A + A++ +++LY+ + ++D +LLEINPL +L A DA Sbjct: 97 YIEEGADIGKEYYLSIVTDRATQKLAFIASSEGGMDIEEVKRAKPEMIITEFVDPLAGLGPEQALKIAVGIGLPAPAQA-QAQAVDIMRRLYQCYMDTDASLLEINPLNCDGQNRLTALDA 216
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_SALAI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora arenicola (strain CNS-205) GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = -3 Query: 2 LVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 334 + E YF+ +LDR + I GG IE +A + P +VK PID G+ A +++ G +V D+ A+E L+K F D TL+E+NPLA T L+ DA Sbjct: 96 VAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFPAEVVDQ--AVEVAVDLWKAFVAEDATLVEVNPLARTGQGGLLLLDA 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DELAS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E Y + + DR T I S+GG IE++A P I+ + +D G+T ++ G+ I+ +KLYK + ++D +L+EINPL S +VA DA Sbjct: 97 YIEDGADIQKEYYLSCVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIITIFVDPLVGLTQAQGEELAKGIGMPADSTAQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNVVALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sucC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11 Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DA Sbjct: 97 YIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLDKDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ZYMMO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Zymomonas mobilis GN=sucC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11 Identity = 37/117 (31.62%), Postives = 58/117 (49.57%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 + E +S+ E Y ++++DR+T + +GG IE +A++ P I ++ ID G + L I+ LYK F SD +LLEINPL ET+ +L+ DA Sbjct: 107 ITEAVSIAREFYLSLLVDRQTGRVTFVASPEGGMDIETVAKEKPEAIHRIAIDPATGFQPHHGRMIGFALGLSGDVFKQGIKLAASLYKAFTTSDMSLLEINPLVETNDGKLLPVDA 223
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_HALLT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=sucC PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11 Identity = 35/113 (30.97%), Postives = 63/113 (55.75%), Query Frame = -3 Query: 2 LSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 340 + V+E+Y + +DR P+++ ++GG +IE++AE+ P+ I + +D G+ A KVV D + LY L+ E+D + +E+NP+ TS + ++AADA Sbjct: 94 VDFVDELYVGVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVVYEAGVDADVALDVASILTTLYDLYEENDASEIEVNPVMITSDRDVIAADA 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DESK1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=sucC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.781e-11 Identity = 35/115 (30.43%), Postives = 60/115 (52.17%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + + E+Y ++ +DR T + + GG IE+LA K+P+ I+++P+D F G + A + L + ++ +YK+ + D L+E NPLA T +L A DA Sbjct: 93 EAVCISRELYMSLTVDRATRKLVYLASGMGGVEIEELARKHPDKILRIPVDPFIGYSGYMARHALGFLGLQWDKLGQLDNIMRAMYKIMIDYDAELVEFNPLAYTCDGRLTALDA 207
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_CAMJR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter jejuni (strain RM1221) GN=sucC PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.781e-11 Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++V E Y AI+ +R II S+GG IE +A++ P I KV ID G +V L + I + KLYKL+ + D +LEINPL +T+ A DA Sbjct: 97 YIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDA 214 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |