CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DESAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum alkenivorans (strain AK-01) GN=sucC PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.268e-15 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 2 LSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 340 L + E+YF+I++DR TA +I+ GG IE++A P I+KVP+D G+ + L A I+ V+ LYK+F ++DC+LLEINPL T ++A DA Sbjct: 102 LDIAKELYFSIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCRQAAYRLNLPPAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ALKOO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=sucC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.053e-15 Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y A LDR+ + +I +GG IE++A P+ I+K ID G+TD +V L + ND +E +K LY+ F E DC+LLEINPL T +++A DA Sbjct: 100 EGCEIYKEYYIAFTLDRENSKIALIASEEGGMDIEEVAANRPDKILKEIIDPLIGLTDFQGRRVCFNLNIDGSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_MAGSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.599e-15 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y ++++DR T I+ ++GG IE++A +P I+KV ID G ++ GL + N ++ V LYK F + DC+++EINPL T +L+A DA Sbjct: 106 YIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLGLEGKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDA 223
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_GEOLS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=sucC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.599e-15 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + + E Y +I LDR+T+ +I ++GG IE++A+K P+ I + ID F G+ A K+ L A D +E + YK E DC+L+EINPL T L+A DA Sbjct: 99 ETVEIAREFYLSITLDRETSRYCLIASAEGGMDIEEVAQKSPDKIHVLTIDPFTGLRTYQARKIALALGLSGAVCEDCVELILNTYKCCLEKDCSLIEINPLVVTRAGWLLAMDA 213
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BART1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=sucC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.126e-14 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y ++++DR + ++GG IE +AE+ P I +PIDV G+T D A++ D L + R D + LYK FCE D +LLEINPL L DA Sbjct: 107 YIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELHDSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_SULNB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurovum sp. (strain NBC37-1) GN=sucC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.470e-14 Identity = 40/118 (33.90%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 Y+ + + +E Y +++LDRK P+I+ ++GG +IED+AE P I+ VP+D G ++ GL A++ + I +KLYKL+ + D ++EINPL T + +A D Sbjct: 97 YIEDGADIKDEFYLSVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGLGITDKAEQKNIITFAQKLYKLYMDKDAEMIEINPLVRTGSGEFLALD 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PELUB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelagibacter ubique GN=sucC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.470e-14 Identity = 38/118 (32.20%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E ++ E Y + ++DR ++ + I +GG IE++AEK P I+ ID+ + I+D D K++ A + AI +K +YK+F +D ++E+NPL T K+++ DA Sbjct: 97 YVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALADDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_OPITP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.470e-14 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = -3 Query: 2 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 325 E Y AI+LDR T+ P+I+ ++GG IE +A P+ I KV +D G+ D ++V L A+ +A + ++ LY+ F E+D +++E+NPL T Q+ A DA Sbjct: 114 EYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFTAAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQVEALDA 221
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_POLSQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=sucC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.508e-14 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 2 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 325 E YF+I+ DR T +I+ S+GG IE++AE +P I+KV +D G+TD D V G+ A A + K LYK + ++D +L+EINPL ++ A DA Sbjct: 107 EYYFSIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIVAKGIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_POLNS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polynucleobacter necessarius (strain STIR1) GN=sucC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.275e-14 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 2 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 325 E YF+I+ DR T +I+ S+GG IE++AE +P I+KV +D G+TD D + G+ A A + K LYK + ++D +L+EINPL ++ A DA Sbjct: 107 EYYFSIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIIAKGIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDA 214 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |