CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BORPE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella pertussis GN=sucC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.586e-14 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DA Sbjct: 100 EGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BORPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella parapertussis GN=sucC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.586e-14 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DA Sbjct: 100 EGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BORBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella bronchiseptica GN=sucC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.586e-14 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DA Sbjct: 100 EGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BARHE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella henselae GN=sucC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.586e-14 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y ++++DR + ++GG IE +AE+ P I+ +PI+ G+T D A++ D L + R D + LYK FCE D +LLEINPL + L DA Sbjct: 107 YIEDGADIERELYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDALDLHDSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMTNGHLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_EXISA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=sucC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.296e-14 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E ++ E Y ++LDR +I+G S+GG IE++AE P I K +D G+ A ++ + N+ + V KLYK++ E+DCT+ EINPL T ++A DA Sbjct: 97 YIEEGSAIDQEFYLGLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRLAFKMEVPTKLVNEFSDMVMKLYKVYVETDCTIAEINPLVTTKDGNVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_POLSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=sucC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.529e-14 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E Y + + DR++ I S+GG IE++A P I+KV +D G+TD A +V G+ ++ ++KLYK + E+D +L+EINPL S +++A DA Sbjct: 97 YIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGIGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_METJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanocaldococcus jannaschii GN=sucC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.529e-14 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 EKL + E Y +I++DR P+II ++GG IE++AEK P I+K IDV A +V + + + KLYK+F E D T++EINPL T + AADA Sbjct: 90 EKLPIEKEYYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKEAKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADA 204
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia sp. (strain 383) GN=sucC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.529e-14 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR T +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL +S +++A DA Sbjct: 100 EGADIKQELYVSLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacter sulfurreducens GN=sucC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.245e-13 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + + E Y +I LDR T+ +I ++GG IE++ +K P+ I + ID + G+ A ++ L D +E + LYK+ E DC+L+EINPL T L+A DA Sbjct: 99 EAVEIAREFYLSITLDRSTSRYCLIASAEGGVDIEEVVQKSPDKIHVLTIDPYTGLRPFQARRIALALGLSGTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDA 213
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.245e-13 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = -3 Query: 5 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 346 E L + E Y + +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ + A +A + + +Y+LF E DC+++EINPL T ++VA D Sbjct: 100 EGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGINEACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVALD 213 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |