CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_POLNA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas naphthalenivorans (strain CJ2) GN=sucC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.625e-13 Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E Y +++ DR T I S+GG IE++A P I+ ID G+ +E A K+ +G+ A++ +KLYK + ++D +L+EINPL S L+A DA Sbjct: 97 YIEDGADIQKEYYVSLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEFIDPLTGLGEEQAVKIANGIGLPPESTAQAVDIFQKLYKCYMDTDASLVEINPLNRDSKNALMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ACICJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=sucC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.625e-13 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 2 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 325 E+Y ++++DR + +I+ ++GG IE++AEK+P I++V +D +GI+ A ++ GL + V +YK F DC ++EINPL T ++VA DA Sbjct: 116 ELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGLGLDATQMKAFAKFVNAMYKAFVALDCAIVEINPLVVTGAGEVVALDA 223
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacteria bacterium (strain Ellin345) GN=sucC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.625e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E L + E+Y +I+LDR P+ + + GG IE++A K PN I+K I+ G+ A K+ L K A++ ++ LYK + E+D +L+EINP TS +L A DA Sbjct: 103 ETLPIERELYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKIAFKLGLKPELIGQAVKFMQALYKTYDETDASLVEINPFITTSDNRLFALDA 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_NOCSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nocardioides sp. (strain BAA-499 / JS614) GN=sucC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.123e-13 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = -3 Query: 5 SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 337 S+ E YF+ +LDR + I +GG IE++A+ P+ + ++PID G+ + A ++V A A++ V L+K+F E D TL+E+NPLA +G +L A D Sbjct: 94 SIEEEYYFSFLLDRANRRYLCIASVEGGVEIEEVAKTNPDAVRQIPIDPGAGVDEAKAREIVADAKFPEALTEQAVQTVLALWKVFVEEDATLVEVNPLARLAGDKLEALD 204
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_DECAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Dechloromonas aromatica (strain RCB) GN=sucC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.123e-13 Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + +E Y A + DR T I+ +GG IE++A K P IVKV ++ G+TDE A + G+ A IE +K LY + E+D +L EINPL + A DA Sbjct: 100 EGADIKHEYYVAALTDRATQSVAIMASYEGGMDIEEVAHKTPEKIVKVFVNPLVGLTDEQALTLAKGMGMNEASIPQCIETLKSLYTCYMETDASLAEINPLIHEGDGTVKALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURTA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=sucC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.123e-13 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y I++DR + +++ S+GG IE++AEK P I KV ++ G+ D +A + + A A E +K LYK F E+D +L EINPL T +++A DA Sbjct: 100 EGADIKKELYVGIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSTGLQDAEADDLAKKIGVPDASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BACLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.123e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y ++LDR T+ +++ +GGT IE++AEK P IVK ID G+ A K+ + A++ + LYK F E DC++ EINPL T +++A DA Sbjct: 100 EGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPKELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BARBK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + ++ E+Y ++++DR T + ++GG IE +A + P I + ID G+TD D K+ D L R D + LYK FCE D +LLEINPL +L DA Sbjct: 107 YIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDELNLSGNAREDGEKLFPILYKAFCEKDMSLLEINPLIVMDDGRLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V + A++ + LY F E DC++ EINPL T +++A DA Sbjct: 100 EGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_MARMM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Maricaulis maris (strain MCS10) GN=sucC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.621e-13 Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y +++++R+T + ++GG IE++A + P I + ID G+TD AA V D L + R D + K LY FCE D ++LEINPL + DA Sbjct: 107 YIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLEGQAREDMMGLAKILYTAFCEKDMSMLEINPLIVMDNGHVRVLDA 224 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |