CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURM7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia mallei (strain NCTC 10247) GN=sucC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.729e-13 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y I++DR + +++ S+GG IE++AEK P I KV ++ G+ D +A + + A A E +K LYK F E+D +L EINPL T +++A DA Sbjct: 100 EGADIKKELYVGIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSVGLQDAEADDLAKKIGVPDASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.729e-13 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ + + E+Y ++++DR + +GG IE +AE+ P I+ +P+D G+T D ++ D L R D + LYK FCE D +LLEINPL L DA Sbjct: 107 YIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELHDNARKDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDA 224
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BACTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides thetaiotaomicron GN=sucC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.729e-13 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + + E Y + +DR T I++ + GG IE++A + P I++ ID F G+ D A + L P + ++ LYK+F E+D +L+E+NPLA T+ L+A DA Sbjct: 93 EAVDIAAEYYVSFTIDRNTRSVILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPHIEQAGRMAAILQALYKIFMENDASLVEVNPLALTAKGILMAIDA 207
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: MTKA_RHILO (Probable malate--CoA ligase subunit beta OS=Rhizobium loti GN=mtkA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.729e-13 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 YL E + + E+Y +LDRK +I+ + GG IED+ EK PN I++ +D G+ A ++ GL A E + Y++F + D ++LEINPL T L+A DA Sbjct: 97 YLEEAVDIAQELYVGFVLDRKEERVMIVASAAGGMEIEDIVEKEPNSILRTSVDPGVGMQRFQAREIAFGLGLDHNLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGNLIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_NITSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitratiruptor sp. (strain SB155-2) GN=sucC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.176e-13 Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E + E Y ++LDR + P+++ ++GG IE++A K P I+KV ID G K+ GL + I+ + LYK++ + D L+EINPL +T + +A DA Sbjct: 97 YVEEGADIQKEYYLGMVLDRSSEMPVMMASTEGGMEIEEVAAKTPEKIIKVAIDPTIGFQGFHGRKLAFGLGLAKEEIRPFIQFAEALYKVYMDKDANLIEINPLIKTGDGRFLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_NEOSM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Neorickettsia sennetsu (strain Miyayama) GN=sucC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.176e-13 Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = -3 Query: 2 SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 337 S++ E Y ++++DR+ A II +GG IE++A P I KV +D+ GI+D A K+ L +A VKKLY LF D + +EINPL S + +A DA Sbjct: 106 SILKEYYLSMVVDRENAKVAIIASEEGGMDIEEIARSTPEKIKKVFVDLSIGISDFHARKIGFELGLSLAQIKQFTPLVKKLYALFVTRDASQVEINPLIANSKGEFIALDA 217
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURM1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=sucC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.176e-13 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++VA DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQA----DDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RICM5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=sucC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ ++ E YF+I+ DR + I ++GG IE++AEK P I+K +D G+ D + L K E VK +Y F E+D T +EINPL S L+A DA Sbjct: 97 YIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEEIAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = -3 Query: 2 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 352 + E + L E YFAI+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L A + + +YKLF DC+L+EINPL T+ ++ A DA Sbjct: 105 VAEAVDLKKECYFAILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDA 221
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC2_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Streptomyces coelicolor GN=sucC2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = -3 Query: 5 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 352 L E + E Y + +LDR + G + I ++GGT IE++A + P + ++P+D G+ A ++ D GL P+ D + +L+K+ D L+E+NPL T+ ++VA D Sbjct: 90 LAEPCEIEREFYVSYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLPPQTVD------TLVRLWKVLVREDALLVEVNPLVRTAEGRIVALD 201 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |