CN184502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_WOLSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolinella succinogenes GN=sucC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.054e-12 Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = -3 Query: 2 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 355 Y+ E L + E Y I+LDR P+I+ +GG IE++A+ PN I+KV +D G K+ L ++ L++L+ + D ++EINPL TS K+ VA DA Sbjct: 97 YVEEGLGIEREYYLGIVLDRSLEMPVIMASRQGGVDIEEVAKNSPNEIIKVAVDPMIGFRPFHGRKLAFALGLAKEQVGLFVDFCTSLFRLYVQKDAEIVEINPLVFTSCKRFVALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURCM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=sucC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.054e-12 Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + +++A DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia ambifaria (strain MC40-6) GN=sucC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.054e-12 Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + +++A DA Sbjct: 100 EGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_PROAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Propionibacterium acnes GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 34/116 (29.31%), Postives = 66/116 (56.90%), Query Frame = -3 Query: 5 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 352 + E + E YF+I+LDR + + +GG IE LA++ P + KVP+D +G+ D A +++ ++++ + V KL++ + + D TL+E+NP+ +T +++A D Sbjct: 91 VAEGADIAEEYYFSILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAID 206
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_LEPBA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = -3 Query: 5 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 355 YL + L + E Y +I+LDR II+ ++GG IE++AE +P I+K+ ID GI ++ L + V +Y + + D LLEINPL T +++A D Sbjct: 99 YLEQGLEIAKEYYLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGIQGSQVRELAFALGIPTEAQKSFTALVNSVYNAYIKEDAALLEINPLILTKQNEIIAGD 215
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_CHLFF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila felis (strain Fe/C-56) GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 35/113 (30.97%), Postives = 66/113 (58.41%), Query Frame = -3 Query: 2 LSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 340 +++ +E Y A+++DRK P I+ GG IE++A+KYP+ ++ VP+ I + +++ + + ++ +KKL + F ++D +LLEINPL T ++L+ DA Sbjct: 102 VNIASEYYLAVIMDRKNRCPAIMLSKAGGMDIEEVAQKYPDQLLTVPLTPSARIYNYQLRQIIKFMNWEGDTGKQGVQLIKKLVQCFYDNDASLLEINPLVLTQEEELLVLDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCV (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila caviae GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 36/113 (31.86%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 2 LSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADA 340 +++ E Y A+++DRK P I+ GG IE++A+KYP+ ++ VP+ F + + +++ + + R + +KKL + F ++D +LLEINPL T L+ DA Sbjct: 102 VNIAAEYYLAVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQIIKFMNWEGDIRKQGAQLIKKLVQCFYDNDASLLEINPLVLTQEGDLLVLDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURVG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++ A DA Sbjct: 100 EGADIKQELYVSLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARTILQGLYKAFWETDASLAEINPLNVSGDGKVTALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_BURCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=sucC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.797e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -3 Query: 2 EKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSGKQLVAADA 346 E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++ A DA Sbjct: 100 EGADIKQELYVSLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDA 214
BLAST of CN184502 vs. ExPASy Swiss-Prot
Match: SUCC_RENSM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=sucC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.347e-12 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = -3 Query: 5 LCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAAD 352 + + + E YF+++LDR + + +GG IE LA + P + ++ +D GI A ++VD G A V D IE +KKL+ +F + D TL+E+NPL +T +++A D Sbjct: 90 IAQGADIAEEYYFSVLLDRANRNYLAMCSVEGGVEIEVLAVERPEALARIAVDPAVGIDQAKAEEIVDAAGFAADVLD--GVIETIKKLWDVFQKEDATLVEVNPLVKTGDGRILALD 205 The following BLAST results are available for this feature:
BLAST of CN184502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184502 ID=CN184502; Name=CN184502; organism=Citrus sinensis; type=EST; length=357bpback to top |