CN184479

Overview
NameCN184479
Unique NameCN184479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13508 contig Csv1_Contig13508:21..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184479 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 79/193 (40.93%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  101 SDALYQYILETSVYPREPESMKELRELTAKHPWN-IMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP-PDAPLRKYVRYYRDFV 673
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL+Y+++ + LV+ GG++  DNTL+ G V  P  D P    VR   D +
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADPAADDPDTVAVRTLNDLL 197          
BLAST of CN184479 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26
Identity = 62/155 (40.00%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  164 KELRELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP 625
            KEL + T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 189          
BLAST of CN184479 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25
Identity = 61/155 (39.35%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  164 KELRELTAKH-PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP 625
            KEL + T ++   +IM T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 188          
The following BLAST results are available for this feature:
BLAST of CN184479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY5.919e-2840.93O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI5.540e-2640.00Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI1.234e-2539.35Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184479 ID=CN184479; Name=CN184479; organism=Citrus sinensis; type=EST; length=707bp
GAGGCAAAAGAAAAGATTTGCGTCAATGGCGTCCAACGCAGAAGATCAAC
AAAACCAACAAGGCAGACACCAGGAAGTTGGTCACAAGAGCCTGCTCCAA
TCCGATGCCCTCTACCAGTATATTCTTGAAACCAGTGTGTACCCAAGAGA
GCCTGAATCAATGAAGGAGCTTAGAGAATTGACTGCCAAACATCCATGGA
ACATTATGACAACGTCGGCAGACGAAGGGCAGTTCTTGAACATGCTGTTG
AAGCTGGTCAATGCAAAGAACACAATGGAGATTGGAGTCTACACAGGCTA
CTCTCTTTTGGCCACTGCCCTTGCCCTTCCTGATGACGGCAAGATTTTGG
CCATGGACATCAACAGAGAAAATTATGAATTGGGGCTGCCAGTTATCCAA
AAAGCTGGTGTTGCTCACAAGATTGACTTCAGAGAAGGCCCTGCCCTGCC
TGTTCTTGACCTGCTGATCCAAGATGAGAAGAACCATGGGTCCTTTGACT
TCATATTTGTGGACGCTGATAAGGACAACTACCTAAACTACCACAAGAGG
TTGATTGAGTTGGTGAAGGTTGGAGGGGTGATCGGGTACGACAACACCCT
ATGGAACGGATCCGTCGTGGCACCACCTGATGCTCCCCTTAGGAAGTACG
TTAGGTATTACCGAGACTTCGTCTTGGAGCTCAACAAGGCCCTTGCTGCT
GACCCCA
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