CN184478

Overview
NameCN184478
Unique NameCN184478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length325
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.860e-42
Identity = 75/92 (81.52%), Postives = 87/92 (94.57%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            SFDF+FVDADKDNYLNYH+RL++LVK+GG+IGYDNTLWNGSVV P DAP+RKY+R+YRDFVL LNKALAAD R+EIC LPVGDGVT+CRR+K
Sbjct:  167 SFDFVFVDADKDNYLNYHERLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADDRVEICQLPVGDGVTLCRRVK 258          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.414e-41
Identity = 76/91 (83.52%), Postives = 86/91 (94.51%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            ++DFIFVDADKDNY+NYHKR+I+LVKVGG+IGYDNTLWNGSVV PPDAP+RKY+RY RDFVLEL KALA DPRIEICMLPVGDG+T+ RRI
Sbjct:  141 TYDFIFVDADKDNYINYHKRIIDLVKVGGLIGYDNTLWNGSVVGPPDAPMRKYLRYCRDFVLELIKALAVDPRIEICMLPVGDGITLSRRI 231          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.042e-40
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            SFDF FVDADKDNYLNYH+RL++LV+ GG+IGYDNTLWNGSVV P DAP+RKY+R+YRDFVL LN ALAAD R+EIC LPVGDGVT+CRR+K
Sbjct:  173 SFDFAFVDADKDNYLNYHERLLKLVRPGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLALNSALAADDRVEICQLPVGDGVTLCRRVK 264          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.203e-24
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            S+DF FVDADK NY+NYH+RLIELVKVGG+I YDNTLW G+ VA P++ +  +++     V +LN+ L +D RI+I  LPVGDG+T CRR+
Sbjct:  151 SYDFAFVDADKTNYVNYHERLIELVKVGGIIAYDNTLWGGT-VALPESEVPDFMKNNWVCVTKLNEILGSDARIDIAHLPVGDGITFCRRV 240          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.018e-23
Identity = 47/90 (52.22%), Postives = 68/90 (75.56%), Query Frame = -2
Query:   52 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 321
            FDF F DADK +Y+N+H+RL++LVKVGG+I +DNTLW G V    D  + +++R YR  ++E NK LA DPR+E+  + +GDG+T+CRR+
Sbjct:  143 FDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLWFGFVAEDEDG-VPEHMREYRAALIEFNKKLALDPRVEVSQISIGDGITLCRRL 231          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.330e-23
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = -2
Query:   52 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 321
            FDF FVDADK NY NYH+RLI L+KVGG+I YDNTLW GS VA PD+   ++    +   LELNK L+AD R++I    +GDG+TICRR+
Sbjct:  143 FDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGS-VAEPDSSTPEWRIEVKKATLELNKKLSADQRVQISQAALGDGITICRRL 231          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.126e-22
Identity = 46/90 (51.11%), Postives = 66/90 (73.33%), Query Frame = -2
Query:   52 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 321
            FDF FVDADK +Y +YH++L++LVK+GG+I YDNTLW G V    D  + + +R  R  ++E NK L++D R+EI  + +GDGVT+CRR+
Sbjct:  145 FDFAFVDADKSSYKHYHEQLLKLVKIGGIIAYDNTLWYGLVAKEVDDEVPEPLRMVRTVIMEFNKLLSSDLRVEISQISIGDGVTLCRRL 234          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.530e-22
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = -2
Query:   52 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 321
            +DF FVDADK NY+ + ++L++LVKVGG+I +DNTLW G+++   +  +  ++R YR+ +LE NK LA DPR+EI  + +GDG+T+CRR+
Sbjct:  144 YDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWFGTLI-QKENEVPGHMRAYREALLEFNKILARDPRVEIAQISIGDGLTLCRRL 232          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = -2
Query:   55 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP-PDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRR 324
            +FD +FVDADK  YL+Y+++ + LV+ GG++  DNTL+ G V  P  D P    VR        LN  L  D R++I +L V DG+T+ RR
Sbjct:  136 AFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADPAADDPDTVAVR-------TLNDLLRDDERVDIALLTVADGITLARR 219          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.568e-11
Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            +FD   VDADK+N   Y++R ++L++ GG++     LW G V+ PP   +        + V  LN+ +  D R+ I +LP+GDG+T+  +I
Sbjct:  178 TFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVA------AECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262          
The following BLAST results are available for this feature:
BLAST of CN184478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CAMT1_MAIZE4.860e-4281.52Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=... [more]
CAMT_CITNA1.414e-4183.52Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT2_MAIZE2.042e-4079.35Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT_STELP1.203e-2458.24Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH1.018e-2352.22Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT3_ARATH1.330e-2358.89Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_POPKI1.126e-2251.11Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH9.530e-2250.00Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
MDMC_STRMY2.353e-1242.86O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CMTD1_HUMAN7.568e-1135.16Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184478 ID=CN184478; Name=CN184478; organism=Citrus sinensis; type=EST; length=325bp
CCGGTCATCGGCGGCGGACCCCCTCAGAGAATTGGTTTAGGCATTTCACT
TGATCCGACGGCAGATAGTGACTCCATCGCCAACGGGGAGCATGCAGATT
TCAATCCTGGGGTCAGCAGCAAGGGCCTTGTTGAGCTCCAAGACGAAGTC
TCGGTAATACCTAACGTACTTCCTAAGGGGAGCATCAGGTGGTGCCACGA
CGGATCCGTTCCATAGGGTGTTGTCGTACCCGATCACCCCTCCAACCTTC
ACCAACTCAATCAACCTCTTGTGGTAGTTTAGGTAGTTGTCCTTATCAGC
GTCCACAAATATGAAGTCAAAGGAC
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