CN184476

Overview
NameCN184476
Unique NameCN184476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:409..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 192.2 bits (487), Expect = 2.217e-48
Identity = 94/140 (67.14%), Postives = 107/140 (76.43%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 424
            L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  110 LFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.781e-48
Identity = 96/142 (67.61%), Postives = 110/142 (77.46%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 430
            +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+L +VA RNND Q+ DFVES++L EQVEAI  I++YV+QLR VGKGHGVWHFDQMLL E
Sbjct:  113 MYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.314e-47
Identity = 94/142 (66.20%), Postives = 107/142 (75.35%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 430
            L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMELAL+LEKL NEKL +L  VA R NDPQ+ DF+ESEFL EQ EAINKI+KYV+QLR VGKGHGVWHFDQMLL E
Sbjct:  111 LFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46
Identity = 92/146 (63.01%), Postives = 112/146 (76.71%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 442
            ++AYFDRDN+AL+GL                  ME+QN RGG+VKL SI  PP+EFDH EKGDALYAMELAL LEKLTN++LL+L +VA R+ND  + DF+ESEFL EQV+AI KI++YV+QLR VG+GHGVW FDQMLL+EG AA
Sbjct:  106 MFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.710e-46
Identity = 91/141 (64.54%), Postives = 106/141 (75.18%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 427
            L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKLTNEKLL++ SVA+RNND +M  F+E E+L EQVEAI KI++YV+QLR VGKGHGVWHFDQ LLH
Sbjct:  108 LFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.885e-46
Identity = 92/140 (65.71%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 424
            LYAYFDRDN+AL+GL                  MEYQN RGG+VKL  ++ P SEFDH EKGDALYAMELALSLEKL NEKLL+L SVA +N+D Q+ DF+ES FL EQVEAI KI++YVSQLR +GKGHG WHFDQ LL
Sbjct:  116 LYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 424
            +YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELALSLEKL NEKLL+L SVA +NND  + DF+ESEFL EQVEAI  I++YV+QLR VGKGHG WHF+QMLL
Sbjct:  118 MYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 93/143 (65.03%), Postives = 106/143 (74.13%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGVWHFDQMLLHE 430
            L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L+LEKL NEKL SL  VA R NDPQ+ DF+ESEFL EQ EAINK++KYV+QLR VG KGHGVWHFDQMLL E
Sbjct:  108 LFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21
Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 424
            YFDRD++AL G                   M+YQN RGG++ L  I +P    D  E G  L AM++AL LEK  N+ LL L  +   ++D QM DF+ESEFL EQV++I +++ Y++ L+ VG G G + FD+  L
Sbjct:   38 YFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGD 436
            +FDRD++AL G                   M YQ  RGG++    I +P +     E    L AME+AL +E+  NE LL+LR VA++NND Q  +F+E EFLGEQV  I K+A YV+ L+  G G G + FD+  L  G+
Sbjct:   36 HFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCGPGLGEYIFDKETLQGGE 172          
The following BLAST results are available for this feature:
BLAST of CN184476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI1_SOYBN2.217e-4867.14Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI2_TOBAC3.781e-4867.61Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_MAIZE9.314e-4766.20Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_TOBAC2.075e-4663.01Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_PEA2.710e-4664.54Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI3_ARATH7.885e-4665.71Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI4_ARATH1.756e-4565.00Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_MAIZE6.675e-4565.03Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRIS_LYMST2.310e-2140.88Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_ECHGR1.146e-2040.43Ferritin heavy chain OS=Echinococcus granulosus PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184476 ID=CN184476; Name=CN184476; organism=Citrus sinensis; type=EST; length=693bp
CATTCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTG
CCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAG
TTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCAT
AATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGCCTTGT
ATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCTT
CTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAGA
TTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGA
TCGCTAAATATGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGTA
TGGCACTTCGATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAG
AACCATATTGTTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAAA
TGTTCTGAAGTATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAATA
AGCTGAAACAGTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTTG
CTTTATCATATTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCTT
TTTCTTTATTTAGTAACAGACAGTGTGAAGGGATCTAATAGTT
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