CN184476

Overview
NameCN184476
Unique NameCN184476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:409..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 54/145 (37.24%), Postives = 80/145 (55.17%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLLHE 430
            +YA+FDRD++AL  +                  M+YQN RGG+V L  I +P  +    E G+ L AM+ AL LEK  N+ LL L  +A    DP + DF+ESE+L EQV+ I +I  +++ L+ +G    G G + FD+  + E
Sbjct:   34 MYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERD----EWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDKHSVKE 174          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    8 YAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPP-SEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 430
            + YFDRD+++                       +YQN R G+V+   I  P  +EF   E      AM  AL +EK  ++ LL L  VA +NNDP + DF+ESEFL EQ +AI + A Y+++ + VGKG G + FD++ L+E
Sbjct:   36 FTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEFLHEQEDAIKQFADYLTETQRVGKGLGEYLFDKLTLNE 172          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLLHE 430
            YFDRD++AL  +                  ++YQN RGG+V L  I +P  +    E  + L AM+ AL LEK  N+ LL L  +A    DPQ+ DF+ESE+L EQV+A+ ++  Y++ L+ +G    G G + FD+  L E
Sbjct:   37 YFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERD----EWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLGVPQNGMGEYLFDKHTLGE 174          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17
Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 427
            +F+RD++AL G                   M YQN+RGG++ L  I  PP           L+AM+ AL LEK  N+ L+ L +V +R+ D    DF+ +E+L  QV+++ K++ Y++ L  VG G G + FD+  LH
Sbjct:   36 HFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAPPQ----LSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETLH 169          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLLHEGD 436
            YFDRD++AL+                    M+ QN RGG++ L  I +P  E+D  E G  L AME AL LEK  N+ LL L  +A   NDP + DF+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D
Sbjct:   22 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGHSD 161          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGK---GHGVWHFDQMLLHEGDA 439
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL L  +A   NDP + DF+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L E D+
Sbjct:   40 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMGAPKYGMAEYLFDKHTLGESDS 180          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLL 424
            YFDRD++AL G                   +++QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL L  V   +NDP M DF+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L
Sbjct:   37 YFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLL 424
            YFDRD++AL G                   M+ QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL L  V   +NDP M DF+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L
Sbjct:   37 YFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLLHEGD 436
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  NE LL L  +A   NDP + DF+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L E D
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECALHLEKNVNESLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRRMGAPESGMAEYLFDKHTLGECD 180          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRIH_HUMAN (Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 2
Query:   14 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGVWHFDQMLLHEGD 436
            YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL L  +A   NDP + DF+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L + D
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSD 180          
The following BLAST results are available for this feature:
BLAST of CN184476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI2_RANCA1.830e-1837.24Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]
FRIH2_SCHMA3.122e-1837.32Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH1_XENLA1.186e-1737.32Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH1_SCHMA1.549e-1734.78Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_RABIT2.024e-1737.50Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIH_CHICK2.024e-1736.55Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]
FRIH_PAGBE2.643e-1736.43Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_TRENE3.452e-1737.14Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH_HORSE4.508e-1737.50Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRIH_HUMAN7.690e-1737.50Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184476 ID=CN184476; Name=CN184476; organism=Citrus sinensis; type=EST; length=693bp
CATTCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTG
CCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAG
TTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCAT
AATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGCCTTGT
ATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCTT
CTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAGA
TTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGA
TCGCTAAATATGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGTA
TGGCACTTCGATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAG
AACCATATTGTTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAAA
TGTTCTGAAGTATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAATA
AGCTGAAACAGTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTTG
CTTTATCATATTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCTT
TTTCTTTATTTAGTAACAGACAGTGTGAAGGGATCTAATAGTT
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