CN184464

Overview
NameCN184464
Unique NameCN184464
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8686 contig Csv1_Contig8686:67..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: KN8R_YEAST (Probable serine/threonine-protein kinase YNR047W OS=Saccharomyces cerevisiae GN=YNR047W PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.340e-16
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  386 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 631
            ML+G+TPF+G    +TF NIL  ++ FP++   S   K L+ +LL ++   RLG   GA ++KKHPFFK V W+L+R   PP
Sbjct:  710 MLFGFTPFKGDNTNETFTNILKNEVSFPNNNEISRTCKDLIKKLLTKNESKRLGCKMGAADVKKHPFFKKVQWSLLRNQEPP 791          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: PKGA_DICDI (Probable serine/threonine-protein kinase pkgA OS=Dictyostelium discoideum GN=pkgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = -1
Query:  302 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP---PEL----DAPLFATDTEKE-YKVVD-------PGMQDLQQN 628
            L G +PF G + Q+TF NIL +++ +P     S  A+ L+ +LL  DP+ RLG + GA EIK HPFFK +NW  +    P   P++    D   F  D  KE YKV D       P +Q+  QN
Sbjct: 1173 LCGVSPFNGSSVQETFQNILQRNISWPEDM--SPEARDLIDKLLALDPRQRLGFN-GAEEIKSHPFFKSINWKTILTQEPYFKPKIENLQDTSYF--DPRKEIYKVSDDFAESCKPFVQNQNQN 1291          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: CEK1_SCHPO (Serine/threonine-protein kinase cek1 OS=Schizosaccharomyces pombe GN=cek1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = -1
Query:  353 LYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 628
            L+GY PF  +T  + F NIL + + +P+   T  S  A  L+ RLL  +P +RLG++ G  EIK HPFFK VNW  +   +PP +  P    DT
Sbjct:  891 LFGYPPFNAETPDQVFQNILARRINWPAEVFTAESSVALDLIDRLLCMNPANRLGAN-GVEEIKAHPFFKSVNWDTILEEDPPFVPKPFSPEDT 983          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = -1
Query:  353 LYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLL-HRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 628
            L G+ PF  +T Q+T+  I++  + L+FP     S  A+ L+ RLL H D   RLG H GA+EIK HPFF+GV+W  +R +  P +      TDT
Sbjct:  605 LIGWPPFCSETPQETYRKIMNFEQTLQFPDDIHISYEAEDLIRRLLTHAD--QRLGRHGGADEIKSHPFFRGVDWNTIRQVEAPYIPKLSSITDT 697          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: CBK1_KLULA (Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = -1
Query:  353 LYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 628
            L G+ PF  +T Q+T+  I++  + L+FP     S  A+ L+ RLL    ++RLG H GA+EIK HPFF GV+W  +R +  P +      TDT
Sbjct:  564 LIGWPPFCSETPQETYRKIMNFEQTLQFPDDIHISYEAEDLIRRLLTHS-ENRLGRHGGADEIKAHPFFSGVDWNTIRQVEAPYIPKLSSVTDT 656          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: CBK1_ASHGO (Serine/threonine-protein kinase CBK1 OS=Ashbya gossypii GN=CBK1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11
Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = -1
Query:  353 LYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLL-HRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 628
            L G+ PF  +T Q+T+  I++  + L FP     S  A+ L+ RLL H D   RLG H GANEIK HPFF+GV+W  +R +  P +      TDT
Sbjct:  565 LIGWPPFCSETPQETYRKIMNFEQTLVFPDDIHISYEAEDLIRRLLSHAD--ERLGRH-GANEIKNHPFFRGVDWETIRQVGAPYIPKLSSVTDT 656          
The following BLAST results are available for this feature:
BLAST of CN184464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
KN8R_YEAST9.340e-1645.12Probable serine/threonine-protein kinase YNR047W O... [more]
PKGA_DICDI1.069e-1139.52Probable serine/threonine-protein kinase pkgA OS=D... [more]
CEK1_SCHPO1.396e-1141.49Serine/threonine-protein kinase cek1 OS=Schizosacc... [more]
CBK1_YEAST1.823e-1142.11Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
CBK1_KLULA3.109e-1140.43Serine/threonine-protein kinase CBK1 OS=Kluyveromy... [more]
CBK1_ASHGO9.047e-1143.16Serine/threonine-protein kinase CBK1 OS=Ashbya gos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005I22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184464 ID=CN184464; Name=CN184464; organism=Citrus sinensis; type=EST; length=631bp
GCAGGACAAAACTTACAAAGTACCCAGCAAAACAGATACAAACCATGCAT
ACAAATAATATATTACATACACAAGGCATCAACAAAATTCTCAGTTTCTT
TCTACAAGCTACAGCAGCCTCCAAGATTATCTATCGACAACAATGCCGAG
GTGAAAGCACAAGCAGAATCAATGAAACTGTTATTACTCGGCAAGTTGAG
CTCCCTTTCCATAGCCTCTACTAAATGGGATGCACGTACCAACACAAATT
TGCAGCAGACACTTCAAATAAAATAACAAAGAATTAGACTCCTCAGAAAA
CGTTTTGTTGCAGATCTTGCATTCCTGGATCCACAACTTTATACTCCTTC
TCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCTCAGGAGGGTTCATGCA
ACGAACTAGTGCCCAATTGACACCTTTGAAAAATGGATGCTTCTTTATTT
CATTTGCTCCTTCATGCGAACCTAATCTGCTCTTTGGATCTCTATGCAAC
AGGCGGTACATTAGCTGCTTTGCATGAAGACTTGTCGGTGTACTTGACGG
AAATTTGAGGTCTTTGTGGAGAATATTTGCGAATGTTTTTTGTCTTGTCT
TGCCCCTGAATGGTGTGTATCCATAAAGCAT
back to top