CN184455

Overview
NameCN184455
Unique NameCN184455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.601e-48
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            ME+AGIHETTYNSIM+CDVDIRKDLYGNIVLSGGSTM PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL
Sbjct:  271 MESAGIHETTYNSIMRCDVDIRKDLYGNIVLSGGSTMXPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348

HSP 2 Score: 59.3066 bits (142), Expect = 3.601e-48
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQ MWI+K EYDESGPSIVHRKCF
Sbjct:  349 ASLSTFQAMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 7.973e-48
Identity = 69/78 (88.46%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            ME+AGIHETT+NSIMKCDVDIRKDLYGN+VLSGG+TMFPGIADRM+KE+T+LAPS+MKIK+VAPPERKYSVWIGGSIL
Sbjct:  270 MESAGIHETTFNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTSLAPSTMKIKIVAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 7.973e-48
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.039e-47
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            MEA GIH+TT+NSIMKCDVDIRKDLY NIVLSGG+TMFPGIADRMSKEITALAPS+MKIKVVAPPERKYSVWIGGSIL
Sbjct:  271 MEAVGIHDTTFNSIMKCDVDIRKDLYNNIVLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSIL 348

HSP 2 Score: 61.6178 bits (148), Expect = 1.039e-47
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  349 ASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT2_ABSGL (Actin-2 OS=Absidia glauca GN=ACT2 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.354e-47
Identity = 70/78 (89.74%), Postives = 76/78 (97.44%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            +E+AGIHETTYNSIMKCDVDIRKDLY NIV+SGG+TM+PGIADRM KEITALAPSSMKIK+VAPPERKYSVWIGGSIL
Sbjct:  271 LESAGIHETTYNSIMKCDVDIRKDLYSNIVMSGGTTMYPGIADRMQKEITALAPSSMKIKIVAPPERKYSVWIGGSIL 348

HSP 2 Score: 62.003 bits (149), Expect = 1.354e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  349 ASLSTFQQMWISKQEYDESGPSIVHRKCF 377
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT3_DICDI (Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 1.354e-47
Identity = 70/78 (89.74%), Postives = 77/78 (98.72%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            ME+AGIHETTYNSIMKCDVDIRKDLY N+VLSGGSTMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MESAGIHETTYNSIMKCDVDIRKDLYSNVVLSGGSTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 60.077 bits (144), Expect = 1.354e-47
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASL TFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLPTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.354e-47
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            MEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 1.354e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACTC_BIOOB (Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.354e-47
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            MEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 1.354e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.354e-47
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            MEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 1.354e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.354e-47
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            MEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 1.354e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN184455 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.765e-47
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 2 
Query:    5 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 238
            ME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct:  270 MESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347

HSP 2 Score: 62.003 bits (149), Expect = 1.765e-47
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 
Query:  240 ASLSTFQQMWISKGEYDESGPSIVHRKCF 326
            ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of CN184455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 417
Match NameE-valueIdentityDescription
ACT_MESVI3.601e-4896.15Actin OS=Mesostigma viride PE=3 SV=1[more]
ACT22_DICDI7.973e-4888.46Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT_CHLRE1.039e-4792.31Actin OS=Chlamydomonas reinhardtii PE=2 SV=1[more]
ACT2_ABSGL1.354e-4789.74Actin-2 OS=Absidia glauca GN=ACT2 PE=3 SV=1[more]
ACT3_DICDI1.354e-4789.74Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 S... [more]
ACTC_BIOTE1.354e-4791.03Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOOB1.354e-4791.03Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 ... [more]
ACTC_BIOGL1.354e-4791.03Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 S... [more]
ACTC_BIOAL1.354e-4791.03Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]
ACT_PLAMG1.765e-4789.74Actin, adductor muscle OS=Placopecten magellanicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005I15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184455 ID=CN184455; Name=CN184455; organism=Citrus sinensis; type=EST; length=393bp
GAGGATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGA
AGTGTGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGT
GGGGGTTCAACTATGTTCCCCGGTATTGCCGACCGTATGAGCAAGGAAAT
CACAGCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAG
AGAGAAAATACAGTGTTTGGATTGGAGGATCAATCCTTTGCATCCCTCAG
CACCTTCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTC
CATCCATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGG
TGAGTTCTTTTTTTCCCATTTAGTTGGTTTTTTGTGTCTCGTT
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