DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLPP (Chaperone protein dnaJ OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  235 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ------TGCVDDADLAGDVVQNLKEFFG 495
            KD Y++L V R AS  EIKKAY KLAL+ HPD+NPG++EA+EKF+++     +L D EKRA YD+      +G  D +   GD      +FFG
Sbjct:    4 KDYYDLLEVSRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHDGASGGFDFSQAGGDFSDIFNDFFG 96          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGVER AS+ ++KKAY +LA++ HPD+NPGD+EA++KF++  +   +L D  KRA YDQ G
Sbjct:    4 RDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGVER AS+ ++KKAY +LA++ HPD+NPGD+EA++KF++  +   +L D  KRA YDQ G
Sbjct:    4 RDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGVER AS+ ++KKAY +LA++ HPD+NPGD+EA++KF++  +   +L D  KRA YDQ G
Sbjct:    4 RDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA7 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain PA7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGVER AS+ ++KKAY +LA++ HPD+NPGD+EA++KF++  +   +L D  KRA YDQ G
Sbjct:    4 RDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = -1
Query:  295 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 498
            D D Y+VLGV RTASQ+EIK+AY KL L+ HPD NPGD+ A++K + + +   IL DE+KR+ YDQ G
Sbjct:    3 DLDYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = -1
Query:  295 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 498
            D D YE+L V+R AS +EIKKAY KLAL+ HPD+NP + EA+EKF+ + +   +L DEEKRALYDQ G
Sbjct:    3 DIDYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKRALYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = -1
Query:  286 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 495
            KD YEVLGVE+ A+  EIKKA+ KLAL+ HPDKN G++EA+E+F+++ +   +L D +KRA YDQ G  D
Sbjct:    4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTAD 73          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLG+ + A  QEIKKAY KLA++ HPD+NPGD+EA+EKF+++ +   +L D+ KR  YDQ G
Sbjct:    5 RDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFG 71          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = -1
Query:  295 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYDQTG 498
            DKDLY +LGV RTA+Q EIKKAY KL+++ HPD+NP + EEA+EKF+++ K   IL D +KRA YD+ G
Sbjct:    3 DKDLYAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFG 71          
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_WOLPP1.866e-1647.31Chaperone protein dnaJ OS=Wolbachia pipientis subs... [more]
DNAJ_PSEAE1.866e-1655.22Chaperone protein dnaJ OS=Pseudomonas aeruginosa G... [more]
DNAJ_PSEAB1.866e-1655.22Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA81.866e-1655.22Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA71.866e-1655.22Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_ORITB1.866e-1657.35Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_NITSB1.866e-1660.29Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_CLOTE1.866e-1655.71Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_CLOD61.866e-1655.22Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_DICNV2.438e-1659.42Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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