DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV +TAS  EIKKAY KLA++ HPD+NP + EA+EKF++  +   IL D EKR++YD+ G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV +TAS  EIKKAY KLA++ HPD+NP + EA+EKF++  +   IL D EKR++YD+ G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV +TAS  EIKKAY KLA++ HPD+NP + EA+EKF++  +   IL D EKR++YD+ G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV + AS +EIKKAY KLA++ HPD+NPGD  A++KF++ ++   IL D +KRA YDQ G
Sbjct:    4 RDYYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYDQFG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTS8 (Chaperone protein dnaJ OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            KD YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   IL D +KRA YDQ G
Sbjct:    4 KDYYEILGVPKTADEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_EDWI9 (Chaperone protein dnaJ OS=Edwardsiella ictaluri (strain 93-146) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            KD YE+LGV R A ++EIKKAY +LA++ HPD+N GD+EA++KF+++++   IL D +KRA YDQ G
Sbjct:    4 KDYYEILGVSREADEREIKKAYKRLAMKYHPDRNQGDKEAEDKFKEIKEAYEILTDAQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRSD (Chaperone protein dnaJ OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLG+ER A Q+EIKKAY +LA + HPD+NP D+ A EKF+++ +   +L DEEKR+ YDQ G
Sbjct:    4 RDYYEVLGIERGADQKEIKKAYRRLAQKYHPDRNPDDDTAAEKFREVSEAYEVLTDEEKRSAYDQFG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV + AS +++KKAY KLA++ HPD+NP  +EA+EKF++ ++   +LGDE+KRA YD+ G
Sbjct:    4 RDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV + AS +++KKAY KLA++ HPD+NP  +EA+EKF++ ++   +LGDE+KRA YD+ G
Sbjct:    4 RDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            KD YE+LGV R A+++EIK+AY +LA + HPD NPG++EA+EKF+++ +   +L D EKR LYDQ G
Sbjct:    5 KDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFG 71
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ACIBC3.184e-1656.72Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB53.184e-1656.72Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB33.184e-1656.72Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_THIDA4.158e-1656.72Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_ENTS84.158e-1655.22Chaperone protein dnaJ OS=Enterobacter sakazakii (... [more]
DNAJ_EDWI94.158e-1655.22Chaperone protein dnaJ OS=Edwardsiella ictaluri (s... [more]
DNAJ_CHRSD4.158e-1656.72Chaperone protein dnaJ OS=Chromohalobacter salexig... [more]
DNAJ_BORPE4.158e-1653.73Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA4.158e-1653.73Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_ANATD4.158e-1655.22Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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