DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_HALME (Chaperone protein dnaJ OS=Halobacterium mediterranei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D Y+VLGV R AS+ +IK AY K A + HPD +  +E+A+EKF+++QK   +L D+EKR +YDQ G
Sbjct:    3 EDFYDVLGVSRDASKDQIKNAYRKKAAKYHPDVS-DEEDAEEKFKKVQKAKEVLTDDEKRQMYDQLG 68          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = -1
Query:  268 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAG 495
            +D YEVLGV + A++ EIKKAY KL+ + HPD N    +A EKF+++++   +L D+EKRA YD+ G  D  +  G
Sbjct:    4 RDYYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKA-PDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNEAFG 78          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = -1
Query:  268 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAG 495
            +D YE+LGV + A++ EIKKAY KL+ + HPD N    +A EKF+++++   +L D+EKRA YD+ G  D  +  G
Sbjct:    4 RDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKA-PDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNETFG 78          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUSU (Chaperone protein dnaJ OS=Brucella suis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUSI (Chaperone protein dnaJ OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUO2 (Chaperone protein dnaJ OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaJ PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUME (Chaperone protein dnaJ OS=Brucella melitensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUMB (Chaperone protein dnaJ OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUC2 (Chaperone protein dnaJ OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUAB (Chaperone protein dnaJ OS=Brucella abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D YE LGV RTA  + +K A+ KLA++ HPD+NP D EA+ KF+++ +    L D +KRA YD+ G
Sbjct:    4 DYYEALGVTRTADDKTLKAAFRKLAMQYHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYDRFG 69          
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_HALME6.213e-1250.75Chaperone protein dnaJ OS=Halobacterium mediterran... [more]
DNAJ_GEOTN6.213e-1246.05Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_GEOKA6.213e-1244.74Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_BRUSU6.213e-1248.48Chaperone protein dnaJ OS=Brucella suis GN=dnaJ PE... [more]
DNAJ_BRUSI6.213e-1248.48Chaperone protein dnaJ OS=Brucella suis (strain AT... [more]
DNAJ_BRUO26.213e-1248.48Chaperone protein dnaJ OS=Brucella ovis (strain AT... [more]
DNAJ_BRUME6.213e-1248.48Chaperone protein dnaJ OS=Brucella melitensis GN=d... [more]
DNAJ_BRUMB6.213e-1248.48Chaperone protein dnaJ OS=Brucella melitensis biot... [more]
DNAJ_BRUC26.213e-1248.48Chaperone protein dnaJ OS=Brucella canis (strain A... [more]
DNAJ_BRUAB6.213e-1248.48Chaperone protein dnaJ OS=Brucella abortus GN=dnaJ... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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