DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ENT38 (Chaperone protein dnaJ OS=Enterobacter sp. (strain 638) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   IL D +KRA YDQ G
Sbjct:    4 QDFYEILGVPKTAEEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCR (Chaperone protein dnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 36/66 (54.55%), Postives = 54/66 (81.82%), Query Frame = -1
Query:  295 DLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 492
            D Y++LGV ++A+ +EIKKAY K+AL+ HPDKNPG++EA+EKF++L +   +L D++KRA YD+ G
Sbjct:    5 DYYDLLGVSKSATPEEIKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein dnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            KD YE+LGV R A+Q+EIK+AY +LA + HPD NPG++EA+EKF+++ +   +L D EKR  YDQ G
Sbjct:    5 KDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRRKYDQFG 71          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPD (Chaperone protein dnaJ OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 35/67 (52.24%), Postives = 54/67 (80.60%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV + A+  E+KKAY KLA++ HPD+NP +++A+EKF+++++   +LGDE+KRA YD+ G
Sbjct:    4 RDYYEVLGVAKNATDDELKKAYRKLAMKHHPDRNPDNKDAEEKFKEIKEAYEVLGDEQKRAAYDRYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YEVLGV +TAS  EIKKAY KLA++ HPD+NP + EA++KF++  +   +L D EKR++YD+ G
Sbjct:    4 RDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLWR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = -1
Query:  235 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ------TGCVDDADLAGDVVQNLKEFFG 495
            KD Y++L V R AS  EIKKAY KLAL+ HPD+NPG++EA+EKF+++     +L D EKRA YD+      +G       AGD      +FFG
Sbjct:    4 KDYYDLLEVGRNASIDEIKKAYKKLALKYHPDRNPGNQEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHEGASGGFQGFSSAGDFSDIFNDFFG 96          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SHISS (Chaperone protein dnaJ OS=Shigella sonnei (strain Ss046) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIDS (Chaperone protein dnaJ OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIBS (Chaperone protein dnaJ OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIB3 (Chaperone protein dnaJ OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70          
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ENT389.263e-1653.73Chaperone protein dnaJ OS=Enterobacter sp. (strain... [more]
DNAJ_EHRCR9.263e-1654.55Chaperone protein dnaJ OS=Ehrlichia chaffeensis (s... [more]
DNAJ_CALS89.263e-1655.22Chaperone protein dnaJ OS=Caldicellulosiruptor sac... [more]
DNAJ_BORPD9.263e-1652.24Chaperone protein dnaJ OS=Bordetella petrii (strai... [more]
DNAJ_ACIAD9.263e-1653.73Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_WOLWR1.210e-1547.31Chaperone protein dnaJ OS=Wolbachia sp. subsp. Dro... [more]
DNAJ_SHISS1.210e-1552.24Chaperone protein dnaJ OS=Shigella sonnei (strain ... [more]
DNAJ_SHIDS1.210e-1552.24Chaperone protein dnaJ OS=Shigella dysenteriae ser... [more]
DNAJ_SHIBS1.210e-1552.24Chaperone protein dnaJ OS=Shigella boydii serotype... [more]
DNAJ_SHIB31.210e-1552.24Chaperone protein dnaJ OS=Shigella boydii serotype... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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