DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SALG2 (Chaperone protein dnaJ OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SALEP (Chaperone protein dnaJ OS=Salmonella enteritidis PT4 (strain P125109) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SALDC (Chaperone protein dnaJ OS=Salmonella dublin (strain CT_02021853) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SALCH (Chaperone protein dnaJ OS=Salmonella choleraesuis GN=dnaJ PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_SALA4 (Chaperone protein dnaJ OS=Salmonella agona (strain SL483) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_PICTO (Chaperone protein dnaJ OS=Picrophilus torridus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = -1
Query:  286 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVD 495
            KD Y +LGV+R ASQ +IKKA+ +LA + HPD NPG++EA+EKF+++ +   +L D +KR  YD+TG  D
Sbjct:    3 KDYYAILGVDRNASQDDIKKAFRELAKKYHPDANPGNKEAEEKFKEIAEAYEVLSDPQKRKQYDETGTTD 72          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = -1
Query:  235 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG----------------CVDDADLAGDVVQNLKEFFG 498
            D+  YEVLGV + AS  EIK AY KLA++ HPDKN GD+EA+EKF++  +   +L D +KR  YDQ G                  D +D+ GD      EFFG
Sbjct:    3 DRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFG 106          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = -1
Query:  235 DKDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG----------------CVDDADLAGDVVQNLKEFFG 498
            D+  YEVLGV + AS  EIK AY KLA++ HPDKN GD+EA+EKF++  +   +L D +KR  YDQ G                  D +D+ GD      EFFG
Sbjct:    3 DRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFG 106          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP7 (Chaperone protein dnaJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   IL D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70          
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP3 (Chaperone protein dnaJ OS=Klebsiella pneumoniae (strain 342) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   IL D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYG 70          
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SALG21.210e-1552.24Chaperone protein dnaJ OS=Salmonella gallinarum (s... [more]
DNAJ_SALEP1.210e-1552.24Chaperone protein dnaJ OS=Salmonella enteritidis P... [more]
DNAJ_SALDC1.210e-1552.24Chaperone protein dnaJ OS=Salmonella dublin (strai... [more]
DNAJ_SALCH1.210e-1552.24Chaperone protein dnaJ OS=Salmonella choleraesuis ... [more]
DNAJ_SALA41.210e-1552.24Chaperone protein dnaJ OS=Salmonella agona (strain... [more]
DNAJ_PICTO1.210e-1551.43Chaperone protein dnaJ OS=Picrophilus torridus GN=... [more]
DNAJ_LEPBP1.210e-1543.27Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA1.210e-1543.27Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_KLEP71.210e-1553.73Chaperone protein dnaJ OS=Klebsiella pneumoniae su... [more]
DNAJ_KLEP31.210e-1553.73Chaperone protein dnaJ OS=Klebsiella pneumoniae (s... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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