DC887334

Overview
NameDC887334
Unique NameDC887334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEI8 (Chaperone protein dnaJ OS=Haemophilus influenzae (strain 86-028NP) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            KD YEVLG+++ AS+ +IK+AY +LA + HPDKN G +EA+EKF+++ +   +LGD++KRA YDQ G
Sbjct:    4 KDYYEVLGLQKGASEDDIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ESCF3 (Chaperone protein dnaJ OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOUT (Chaperone protein dnaJ OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSM (Chaperone protein dnaJ OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSE (Chaperone protein dnaJ OS=Escherichia coli (strain SE11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLU (Chaperone protein dnaJ OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLC (Chaperone protein dnaJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOL6 (Chaperone protein dnaJ OS=Escherichia coli O6 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOHS (Chaperone protein dnaJ OS=Escherichia coli O9:H4 (strain HS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
[Close]
BLAST of DC887334 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO8A (Chaperone protein dnaJ OS=Escherichia coli O8 (strain IAI1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 
Query:  295 KDLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTG 495
            +D YE+LGV +TA ++EIKKAY +LA++ HPD+N GD+EA+ KF+++++   +L D +KRA YDQ G
Sbjct:    4 QDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 70
The following BLAST results are available for this feature:
BLAST of DC887334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_HAEI81.210e-1553.73Chaperone protein dnaJ OS=Haemophilus influenzae (... [more]
DNAJ_ESCF31.210e-1552.24Chaperone protein dnaJ OS=Escherichia fergusonii (... [more]
DNAJ_ECOUT1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSM1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSE1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOLU1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli O17:K52... [more]
DNAJ_ECOLC1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOL61.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli O6 GN=d... [more]
DNAJ_ECOHS1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli O9:H4 (... [more]
DNAJ_ECO8A1.210e-1552.24Chaperone protein dnaJ OS=Escherichia coli O8 (str... [more]

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Properties
Property NameValue
Genbank descriptionDC887334 EIC Citrus sinensis cDNA clone EIC0215 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887334 ID=DC887334; Name=DC887334; organism=Citrus sinensis; type=EST; length=726bp
TTGGTAGGTTTTAGTTGCTTTCAGTTCTCCTGCAGCTATTGTCTCGTCAA
GAATATCCTTGAAACGGTGTGAATCAAGTTTCTGGTCCGAACAAAGCATT
GAACAGAAAAGCCTGTTCATATTCCCCTTGTACTTCTTATACAGATCAAT
CAAATCTTTCTTCTCTGAATCAGATCCCCTGTAGTTTGCCTCAAACTCTT
CAATATCAGCCTCAGTGACCTTTTTGTACATGGCTCCAAAAAACTCTTTC
AAATTTTGAACAACATCCCCAGCCAGGTCAGCATCATCGACACAACCGGT
CTGGTCATAAAGAGCCCGTTTTTCTTCATCACCAAGAATTGAAATGACCT
TTTGTAGTTGTTGAAATTTCTCCTTCGCCTCCTCATCACCAGGATTTTTA
TCTGGATGGAGTCGTAAGGCCAATTTATAGTATGCTTTCTTTATTTCCTG
TTGAGATGCTGTCCTTTCAACACCAAGAACCTCATAAAGGTCCTTATCAT
TTGAAGAAGATTGATTCAGATTCTCCTGATTTAGTTCTTCTTCTTCTTCT
TCTTCATGCGAAACCCTAGATTTCTTCTGCTTTCCCATTTTACCCCTTTT
AAATTTCTTTACTTTGCTTTCCAAAGTGAAAGAAGCAAAGGGTTGGGGTT
CTTATACCAGTGGTAGTACTGGTGCTGAATAAAATTTTCGTCTCCGATTT
ATTCCCGCCATTTCGGCTCTTTTCCC
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