CN184381

Overview
NameCN184381
Unique NameCN184381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_RAT (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus GN=Adi1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.787e-41
Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            ++QAWYMD+S  D R+PH   P   V L+QL  LGVL W+LDAD YE D EL +IR+ R YS+MD   +C + LPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ +KW   +  E+ +       +       + NY+KAMRLF
Sbjct:    1 MVQAWYMDESTADPRMPHRAQPDRPVGLEQLRTLGVLYWKLDADKYENDPELEQIRKTRNYSWMDIITICKDSLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKW-IRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_HUMAN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Homo sapiens GN=ADI1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40
Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            ++QAWYMDD+  D R PH  DP   V L+QL  LGVL W+LDAD YE D EL KIR +R YS+MD   +C +KLPNYEEKIK F+EEHLH D+EIRY + GSGYFDVRD+ ++W   +  E+ +       +       + NY KAMRLF
Sbjct:    1 MVQAWYMDDAPGDPRQPHRPDPGRPVGLEQLRRLGVLYWKLDADKYENDPELEKIRRERNYSWMDIITICKDKLPNYEEKIKMFYEEHLHLDDEIRYILDGSGYFDVRDKEDQW-IRIFMEKGDMVTLPAGIYHRFTVDEKNYTKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_CHICK (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Gallus gallus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40
Identity = 80/150 (53.33%), Postives = 102/150 (68.00%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            +++AWYMD+S EDQR PH   P   VSL+QL  LGV   RLDADNYETD  L++IRE   YS+MD   +  +KLPNYEEKIK F+EEHLH D+EIRY + GSGYFDVRD+++KW   +  E+ +       +       + NY+KAMRLF
Sbjct:    1 MVEAWYMDESQEDQRAPHRLQPNRAVSLEQLRRLGVAYRRLDADNYETDPRLKEIREAENYSWMDIVTIHKDKLPNYEEKIKTFYEEHLHLDDEIRYILDGSGYFDVRDKDDKW-IRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_BOVIN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Bos taurus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40
Identity = 78/150 (52.00%), Postives = 103/150 (68.67%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            +++AWY+DD+ +D RLPH  +P   V L+QL  LGVL W+LDAD YE D EL KIR++R YS++D   +  +KLPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ ++W   +  E+ +       +       + NY+KAMRLF
Sbjct:    1 MVEAWYIDDAADDPRLPHRAEPARPVGLEQLRRLGVLYWKLDADKYENDPELEKIRKERNYSWVDIITISKDKLPNYEEKIKMFFEEHLHLDEEIRYILDGSGYFDVRDQEDRW-IRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_XENTR (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus tropicalis GN=adi1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.480e-39
Identity = 78/151 (51.66%), Postives = 104/151 (68.87%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTC-LDVTIALLWIQTNYIKAMRLF 490
            ++QAWYMDDS EDQR PHH  P++ VSL+QL  +GV S+ LDAD YE+D EL KIR++  Y++MD   +  + LPNYEEK+K F+EEHLH D+EIRY + GSGYFDVRD+ ++W       ++ D  T    +       + NY+KAMRLF
Sbjct:    1 MVQAWYMDDSTEDQRKPHHLQPEQPVSLEQLKAVGVHSFSLDADRYESDPELAKIRQENNYTWMDIITIHKDTLPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDKEDRWIRIF--MQKGDMITLPAGIYHRFTLDENNYVKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_DANRE (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Danio rerio GN=adi1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.342e-37
Identity = 74/151 (49.01%), Postives = 101/151 (66.89%), Query Frame = 2
Query:   41 VIQAWYMDD-SDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            V +AWYMD+ S EDQRLPH   P + VS+ QL  +GV  W+L+AD YE D EL+KIRE++GYS+MD   + P+KLP+Y+ K+K F+EEHLH D+EIRY + GS YFDVRD  ++W   +   + +       +       ++NY KAMRLF
Sbjct:    3 VFEAWYMDEESGEDQRLPHKLSPNQPVSVQQLEHIGVFHWKLNADIYENDPELQKIREEKGYSFMDIITIHPDKLPDYQNKLKMFYEEHLHLDDEIRYILEGSSYFDVRDEGDRW-IRIAVSKGDLITLPAGIYHRFTVDESNYTKAMRLF 152          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_XENLA (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Xenopus laevis GN=adi1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 77/151 (50.99%), Postives = 99/151 (65.56%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTC-LDVTIALLWIQTNYIKAMRLF 490
            ++QAWYMDDS EDQR PH       VSL+QL  LGV S  LDAD YE+D EL KIR++  Y++MD   +  + +PNYEEK+K F+EEHLH D+EIRY + GSGYFDVRD+ +KW       ++ D  T    +       + NY+KAMRLF
Sbjct:    1 MVQAWYMDDSAEDQRKPHRLQQDVPVSLEQLKALGVDSLSLDADRYESDPELAKIRKENNYTWMDIITIHKDTMPNYEEKLKIFYEEHLHLDDEIRYILEGSGYFDVRDQKDKWIRIF--MQKGDMITLPAGIYHRFTLDENNYVKAMRLF 149          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: ARD4_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Oryza sativa subsp. japonica GN=ARD4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.154e-33
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 2
Query:   53 WYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTCLDVTIALLWIQTNYIKAMRLF 490
            W + ++ E++     ++P E + L +L E+GVL W LD    E++EEL KIR +RGYSY D  E+CP+KL NYEEK+K+F+ EH+H DEEIRYC+ GSGYFDVRD+++KW     KE  +       +    +    NYIK MRLF
Sbjct:    6 WMLGENGEEKSF---ENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKE-GDMIILPAGIYHRFIVDSNNYIKLMRLF 147          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_DROME (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Drosophila melanogaster GN=CG32068 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 5.519e-29
Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 2
Query:   41 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQL-SELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKW 382
            ++Q WYMD  + DQRL HH++P  ++ LD L  + GV  ++++AD Y++D  L ++R  RGY+Y D      + LP+Y  K+K FF EHLHTDEEIR  + GSGYFDVRD  + W
Sbjct:    1 MVQVWYMDTEETDQRLEHHRNPPAYLELDDLYQKTGVEYFKINADEYQSDNTLTELRAKRGYTYDDEITCSEKCLPDYANKLKAFFTEHLHTDEEIRLILEGSGYFDVRDNEDNW 115          

HSP 2 Score: 24.6386 bits (52), Expect = 5.519e-29
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  430 GCYHRFTLDTD 462
            G YHRFTLDT+
Sbjct:  131 GIYHRFTLDTN 141          
BLAST of CN184381 vs. ExPASy Swiss-Prot
Match: MTND_DICDI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Dictyostelium discoideum GN=adi1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 2
Query:   95 HKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWNSHMGKERRNDCFTC-LDVTIALLWIQTNYIKAMRLF 490
            + +  + +SLD L E  VL + +D +     E L  + ++RGY   D  ++  E  P  E+K+K FFEEHLH DEEIR+ + G G+FD+RD+N+KW     KE++ D      ++       ++  I AMRLF
Sbjct:    6 YDNESDVISLDYLKEHNVLYFPMDREKENYKEPLETLCKERGYKNRDEVKLSKET-PGLEDKLKIFFEEHLHDDEEIRFILDGCGFFDIRDKNDKWVKI--KEKKGDLIIVPANMYHRFALDESRNIHAMRLF 135          
The following BLAST results are available for this feature:
BLAST of CN184381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MTND_RAT4.787e-4153.331,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_HUMAN2.376e-4053.331,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_CHICK2.376e-4053.331,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_BOVIN2.376e-4052.001,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENTR4.480e-3951.661,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DANRE9.342e-3749.011,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_XENLA3.550e-3650.991,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ORYSJ2.154e-3347.261,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DROME5.519e-2947.831,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_DICDI1.832e-1636.841,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005G13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184381 ID=CN184381; Name=CN184381; organism=Citrus sinensis; type=EST; length=490bp
TTCATAAACCATGGTCGCCCCTCAGGATCCTAGAGAGGAAGTTATTCAGG
CATGGTACATGGATGATAGTGATGAAGATCAAAGACTCCCCCATCACAAG
GATCCAAAGGAATTTGTGTCCCTGGACCAGCTTTCTGAACTTGGAGTACT
CAGCTGGCGATTAGATGCTGATAACTATGAAACTGATGAGGAACTGAGGA
AGATTCGTGAAGATCGCGGATATTCTTACATGGACTTTTGCGAGGTTTGC
CCAGAAAAACTGCCAAATTATGAAGAGAAGATCAAAAACTTTTTCGAAGA
ACATCTTCATACAGATGAAGAGATCCGCTACTGTGTGGCAGGAAGTGGTT
ACTTTGATGTCAGGGACCGTAATGAAAAATGGAATTCGCATATGGGTAAA
GAAAGGAGGAATGATTGTTTTACCTGCTTGGATGTTACCATCGCTTTACT
TTGGATACAGACAAACTATATCAAGGCTATGCGTCTGTTT
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