EY666399

Overview
NameEY666399
Unique NameEY666399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD5_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=ACG9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 3
Query:  381 TLSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNMISKTLT--CRIDKKENCENKMDQFLEEMLLPFRSGKALK 650
            +LSI V+GASGDLAKKK FPALF L+++  L P++  +FGYAR+K+TDEELR+ I   L       KK    +K  + ++ +  P+ S +  K
Sbjct:   31 SLSIIVLGASGDLAKKKTFPALFNLFHQGFLNPDEVHIFGYARSKITDEELRDKIRGYLVDEKNASKKTEALSKFLKLIKYVSGPYDSEEGFK 123          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD6_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 3
Query:  384 LSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCE--NKMDQFLEEMLLPFRSG 638
            LSI V+GASGDLAKKK FPALF LY +  L P++  +FGYARTK++DEELR+ I   L   +D+K N E    + +FL+  L+ + SG
Sbjct:   32 LSIIVLGASGDLAKKKTFPALFNLYRQGFLNPDEVHIFGYARTKISDEELRDRIRGYL---VDEK-NAEQAEALSKFLQ--LIKYVSG 113          
BLAST of EY666399 vs. ExPASy Swiss-Prot
Match: G6PD_SOLTU (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Solanum tuberosum GN=G6PDH PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.302e-11
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 3
Query:  384 LSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCENKMDQFLEEMLLPFRSG 638
            LSI V+GASGDLAKKK FPALF LY +  L   +  +FGYARTK++D++LR+ I   L+     KEN E ++ +FL+  L+ + SG
Sbjct:   30 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDDLRSRIRGYLS---QGKEN-EGEVSEFLQ--LIKYVSG 109          
The following BLAST results are available for this feature:
BLAST of EY666399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
G6PD5_ARATH5.700e-1245.16Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD6_ARATH9.722e-1252.27Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD_SOLTU6.302e-1150.00Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666399 ID=EY666399; Name=EY666399; organism=Citrus sinensis; type=EST; length=809bp
CCACGCGTCCGCACAAACCATAAACGTAGTCCATATACACACGCTTGTTC
AGTCTTTTAACTTCTTCACTCCTCTTGATCCATAACTGCATGGCTACTGC
ACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACTCT
TTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGGTA
TCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAATC
CTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGCTG
GAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCTCC
GTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTTGT
TGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTTCG
CCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTTAT
GCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAAAC
TTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAAACAAAATGGATC
AGTTCCTTGAAGAGATGCTTTTACCATTCCGGTCTGGTAAAGCTCTGAAG
GACCATTTTGAAAAATTAAACACGCACTTCGAAACGACAAACAGGGCTGG
AAGCCTCTCCGAACACGGAACTTTCATTAACCAATACCTCCCGAAGATTT
CTTGGGGGAAGGTAGAGAAAGCCGCCTACCCTCAAACGTCCACCCCCCAC
CCGGCTTGC
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